Strain | Pseudomonas aeruginosa strain AZPAE14928 AZPAE14928_contig_21, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAGAGCCTGGTTGAAGGCGTCGATCACCGCCGGGGAGATGGCGTTCACCTTGCCGTTGTTGAGGGTCAGGGTGGCGATGCCGTCTTCGAACTGGTAGCTG ATCAACTCGCTCATGGCAGGATTCCTTTTGGTGGAGTGGCGCAGACCTTACTGATGGGCGTCGTCGGCGTAAAGCGCTTTGGCTGACCCGCGGGTCATGC GCGATTGTGCTTGCGCGGGCCTCCCGAGCAGGGCTCCAGTGACGCCTGCGCGTTCCTGGCAGAAGAAACGGTTGAGTCTGGCCGGGGAAGACAGCAATAT GGGCCCTATCGTTAGTCCGGCCTTGCATGCGGTGCAGGTCACCCGTTTCGAGGATGTCCGCCAGGCGCGCTCAGCCGCCGGGACGAAAACGGACGAAGTT ATCCGGCGGCCTGCTGAAGGCCGGTACGCGGGGGCATCCTCGCGAGGAACCCTATCAATCAGGCGCGGGTCGGGTTACGAACCCGTTGAGGAGATCCAAA
|
|
DNA Sequence for Gene |
>NS44_RS23380
GTGAGCGAGTCCCTGTCCATCCATCATGACGTGGGCGGCCATCAGTTCGAGACGACGGTGGATGGCCATCGTGCCTATCTGGCGTATATGGACCTGGGCA AGCAGACGCTGGACATCTACCGGACCTTCGTACCGGATTCGCTGCGGGGTCGCGGTATCGCTGCCGCGCTGACCGAACACGCCCTGCAGTACGCCGACCG CATGGGCTACAGCGTGATCCCGTCCTGCTCCTACGTGGAGCGTTACATCGAGCGTCGCCAGCGTCAGGCCGATCCGGCCGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCAGGCGCGCAATGAAAAACGCCGGGCATCAGCCCGGCGTTTTCGTTTCCGCCTCGCTCAGCCGCGCTGGCGTTTCGGCAGCACGTCCTTGAGCTTGGCG TGCATGCTGCGGATGCTCTTCTCGGTGGTCGCCCAGTCGATGCAGGCGTCGGTGATGGAGACGCCGTACTGAAGTTGGTCGAGATCCTTCGGAATCGGCT GGCTGCCCCAGCCCAGGTGGCTTTCCACCATCAGGCCGACGATCGAGTTGTTGCCTTCGACGATCTGGTTGCTGACGTTGTCCATCACCAGCGGTTGCAG GGCCGGGTCCTTGTTGGAGTTGGCGTGGCTGCAGTCGACCATGATGTTCAGCGGGATTTTCGCCTTGTTCAGGTCCTGCTCGCAGAGCGCGACGCTGACC GAATCGTAGTTCGGCTTGCCGTTGCCGCCGCGCAACACCACGTGACCGTAGCGGTTGCCCTTGGTGGTGACGATGGATACGCCGCCCTGCTGGTTGATGC
|
|
Amino Acid Sequence |
>acetyltransferase
MSESLSIHHDVGGHQFETTVDGHRAYLAYMDLGKQTLDIYRTFVPDSLRGRGIAAALTEHALQYADRMGYSVIPSCSYVERYIERRQRQADPAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|