Pseudomonas aeruginosa AZPAE14928, NS44_RS20525

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14928 AZPAE14928_contig_18, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTCTTCAGCGGTGCCGGACCGGAACTCTTCGAGCTGTCCCTGGTGGATTTCGCCGGCAACGGCGCGCGCCTGGCGCACAACCGCAAGCTGCTGGAAACG GTGCTCGGGTCGATGGATGCCCTCAGCAGCCGGGTGAGCTGGACCGACACCCTGAAGAGCAAGATCCTGCTCGGCGTCTGGGGCGAGTTTCCCGCCCTCG ACCGCCACTACGTGGCCGCCTGTCGCGCGCTGTATCCACGCCGGGGCCTGACGAGCGTCAACGGCGGGACCCTCACCGCGCTGCACCGCCTGATCGGCGA AGAAAGGCTGTCGTTCCCGCGCCTGGAGACCGCCCGCAAGGGGCTCCTCTACCCCACCGGGCGCCTGGCCGACATGGCTTTCTTCCAGTACGGCCTGGAA AACGCCTGAGGCGCTGCGCCGCCGATCCGGGGGACTTGTAGGCATGCCCTCGCTGTAAGTAGTATGAGACTCATTCTCAATTACAACAGCGATCCCCTCC
DNA Sequence for Gene
>NS44_RS20525
ATGCCGCCGGCCGACGCCTCCCTGCACGACGCTGTGAGCCATCTCTACCAGGACCACCATGGCTGGCTGCAAGGCTGGTTGCGGCGACGCCTGGGCTGCG CGGAAAACGCCGCCGACCTGGCCCAGGACACCTTCGCCCGCCTGCTCGCCTCGCGCCGGGTACTGGATGCGCGCGAACCGCGCGCCTACCTGACCACCGT CGCCAAGGGGCTGATGATCAACTGGTTCCAGCGCCAGTCGCTGGAGCGCGCCTACCTCGATGCCCTGGCCAACCTCCCGGAAGACCTCGCGCCGCCGCCG GAACAGCGGTTGATGGTGCTGGAAACCCTGCATGAAGTAGACGCCCTGCTCGGCAGCCTGCCGGACAGGGTCCGCCAGGCGTTTCTCCTGGCGCAGATCG AAGGCCTGAAGTACGAAGCCATCGCCGAGCGCCTGGGCGTGTCCCTGGGTTCGGTCAAGCGCTACATGCAGCAGGCCTTCCGCCAGTGCCTGGAGCTGAT GGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGCCGCGGACGAAGGCCGGATTCCCTCGCCGATCCTCGACGAGGCCGCCGAGTGGCTGGTGCGCCTGCAGGACAGCGGCTGCACCGACGACACGCGCCA GGCCTGCGCCCAGTGGCGGCAGCGCAGCCCGCAGCACGCCCATGCCTGGGAGCGCGCCGAGCGCCTGCTGCAATGCCTCGGCCGACTGCCGCCGGCGCTG GCCCTGCCGACCCTCGGCCGCGAGCGCGGGCTGGACCGGCGGCGCGCGATCAAGCACCTCGCCCTGGTCCTCGGCGGCGCCTCGCTGGGGCTCGCCACCT GGCAGGCCGAACCGTTGCGCGACTGGCTGGCCGACCAGCGCACCGGCGTCGGCGAACAGCGCCGCCTGCCCCTGCCCGACGGCAGCCTGCTGACCCTGAA CACCGACAGCGCCGTGGACCTGGCCTTCGACGCCAGCCAGCGGCTGGTACGCCTGCTGCGCGGCGAGATCTTCGTCGATAGCCGCGCCGACCCGCGTCCG
Amino Acid Sequence
>RNA polymerase sigma factor
MPPADASLHDAVSHLYQDHHGWLQGWLRRRLGCAENAADLAQDTFARLLASRRVLDAREPRAYLTTVAKGLMINWFQRQSLERAYLDALANLPEDLAPPP EQRLMVLETLHEVDALLGSLPDRVRQAFLLAQIEGLKYEAIAERLGVSLGSVKRYMQQAFRQCLELME
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site