Strain | Pseudomonas aeruginosa strain AZPAE14928 AZPAE14928_contig_12, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGTCGGCGACCATGGTGAACTCGACCGCACCGATGCCGCCCTTCTCCACCGGCGTGCTGCGCCAGGCGTGATGGGTGAACTGCGAGTCGATGGAGACACC GACCACCTCGACGCCCAGCTCGCGGAACTTATCCATGCGGTTGTTGTGGGCAATGATTTCCGAGGGGCAGACGAAAGTGAAGTCGAGCGGCCAGAAGAAC AGTACGACGTACTTGCCGCGCAGGCTGGAAAGCTGGAAGGCATCGACGATGGAACCGTCGCCGAGGACCGCGGCGGCAGTGAAATCGGGGGCTTGCTTGT TGACCAGTACGCTCATCGCGAGGCTCCTAGAAGGTTGGGTTGCGCCCGGCGACGCCAGGCTCCCGGAAGAATATGCAGCGCAGGTTACCCAGCCACGACG ATGCATTGAAATGTCGAATTTCAATTCGCACGATAGAGTCAGCCTATGCTCTCAACCTGCGGCTAGACTCATGCTGTCGCCCATTACCCGTCCTCACCGC
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DNA Sequence for Gene |
>NS44_RS13020
ATGCCCCTACGCACACGCCTGCTCTGGCTGTTCCTGCCGTTGCTGGCCGCCAGTCTCGGCGGTATCTGGCTCTTGTCGGAAAGCATCCTGCTGAGCCGTT TCGACCGAGAGGACCAGCAACGCCTGCAAGAGGGCGCCACCGTCCTGCACAACCGGCTGGACTTCGAGTTGAAGCGCCACCTGGACATCGTTCGCACCTA CGCCTGGTGGGATGCCAGCTACGACTTCATCCAGCGCCCCAACGAGACCTTCGAACAGGAAAACCTCGACCACGAGATGCTCGACGACCTGGGATTCGAC TTCGTCCTGTTCCTCGACGACCGGGGTCACCTGCAACTGAAGCAGTGGTCCCCGCCCGCGCCCGACCAGCGCGTGCTCTTCGGCGCCCCCTCGGCGAGCG ACCAGGCCCTGCTCGAGGCACTGCAGCAACGCGCCATCCGCCTCGGCGCGCTGGACTTTCGCGGACGCACCGACCACAGCCTGAGCGAGCTGCTGCTGGT CGACAACCTGCCGACCCTGCTGGTCAGCGTGCCTATCAGCAACAACCAGGGTAGCGCGCCGGCGAAGGGCGCGATCCTCGCCGGCTACTTCCTCGACCGG GAACGCCTGGCCAACCTCCGCGAACAGATGCAGGCCGACCTGCAAGCGATGCCCAACATCGCCACCGACGCCACCTGGAAGCCGCTGCGCAGCCGCAGCG GCAGTACCCACAACCAGGCCCTGCTCAGCCCACGGCGGTTCATCGGCGAACATGTCCAGCAGGTCTCGGTGCAGTACCTGAGTTCCAGCGGCGAGCCGCA GCTGCGCTTCGACATCACCAAGAAACGCCTGCTCTACATCCAGGGCGAGAAGGCCATCAACTTCTTCCTCGGCGCCTCCCTGCTGGTCGCGCTGGGCGCT TTCCTGGTCGGCTACCTGGCCCTGGAGCTGTGGGTCCTGCGCCGGGTCCAACGGCTCAACCGGGAGGTCGCCGAAGTCGGACGCAACGCCCACTCGATAC GCCTGAGCGACTTCGGCAACGACGAGCTGGGACAACTGGCGGGCGAGATGAACCAGATGCTCGAGCGCCTGGAACACAGCGAGGCGCGCGACCGGGCGAT CCTCCAGTCGATGCGCGACGGCTACTTCGAAATGGACGTCGACGGCGTGATCCTCACCGTCAACCCCGCGCTCTGCCAACTGCTCGGCCAGACGCGCGAA ACGCTGATCGGCCATCCCTACTACGAACTGCTCGGCGAAGACGACCTGGCGCGTGCCCGCCAACCCTTCCAGCGCGCCATGCAGAGCGGCGCAGGCAAGA CCTTCGCCATCCCCCTGCAGCGCGCCGACGGCAGCCTCGGCTACTTCGAGGCCACGGTTTCGCTGATCCACGACCTGCAGGGCGAACTACGGGGCTACCG CGGCATCGTCCGCGACGTCAGCGACCAGATCGCCTACCAGCAGCAATTGCTGGAAATGGCCTACCGCGACCCGCTGACCGGCCTGGGCAACCGCAAGGCC TTCGACGAACAGCTCGGCCAGGCGTTGCTTCGCGCCGGCTCCGGCGGAAGCGAACTGGCGCTGCTGTACCTGGACCTGGACCGCTTCAAGGAGGTCAACG ACCGCTTCGGCCACGACATCGGCGATGCCCTCCTCAGGACCGTCGCCGAACGGGTACGCAGCACCCTGCGGCAGCCGGACAAGGCCTACCGCCTGGGCGG CGACGAATTCGCCGTGCTCCTCGAGGACAGCCAGGAAAACAATCCGCAGCGCCTCGCAGAACGCCTGCTGGCGGCGCTGGTCCAACCGATCGCGCTGAAT GGCGAACGCATCGACTTCGTCACCCCGAGCATCGGCATCGCTCTCTACCCGCGGCATGCCGGCGATGCCGAAGGACTGGTCCGTGCCGCCGACAGCGCCA TGTACGAGGCCAAGCGCCAGCGCAACCACTATTGCCTGTACCAGGCGCCAGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AATGCGCGGTCAAACAGGCTCTGTCGCGGGCTTTCGCCAGTCTGCTAAGGTTTCAGCCCGCATCCCATCGGAGAACCATTCCCTATGCCAGCCCTGAGCG GCCCGCAATACCTCGGCGAAGGCCTGAAGCTGATCATGCGTCCCGGCCTGCGCCTGTTCGTGCTGATCCCCCTGACCCTCAACCTGCTGGTGTTCGCCCT GCTGATCGGCTTCGCGATGCAGCAGTTCAGCCACTGGGTCGACCTGCTGATGCCCAGCCTGCCCGACTGGCTGAGCTTCCTGCAGTACATCGTCTGGCCG TTGTTCGTCCTGCTGGTGCTGGTGATCGTGTTCTTCACCTTCACCATGGTCGCCAACATCATCTCCGCGCCGTTCAACGGCTTCCTCTCGGAAAAGGTCG AGGTGGTGGTTCGCGGCCGCGACGACTTCCCGCCGTTCAGCTGGGCCGAACTGCTGGCGATGATCCCGCGCACCATGGGTCGCGAGATGCGCAAGCTCGC
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Amino Acid Sequence |
>hypothetical protein
MPLRTRLLWLFLPLLAASLGGIWLLSESILLSRFDREDQQRLQEGATVLHNRLDFELKRHLDIVRTYAWWDASYDFIQRPNETFEQENLDHEMLDDLGFD FVLFLDDRGHLQLKQWSPPAPDQRVLFGAPSASDQALLEALQQRAIRLGALDFRGRTDHSLSELLLVDNLPTLLVSVPISNNQGSAPAKGAILAGYFLDR ERLANLREQMQADLQAMPNIATDATWKPLRSRSGSTHNQALLSPRRFIGEHVQQVSVQYLSSSGEPQLRFDITKKRLLYIQGEKAINFFLGASLLVALGA FLVGYLALELWVLRRVQRLNREVAEVGRNAHSIRLSDFGNDELGQLAGEMNQMLERLEHSEARDRAILQSMRDGYFEMDVDGVILTVNPALCQLLGQTRE TLIGHPYYELLGEDDLARARQPFQRAMQSGAGKTFAIPLQRADGSLGYFEATVSLIHDLQGELRGYRGIVRDVSDQIAYQQQLLEMAYRDPLTGLGNRKA FDEQLGQALLRAGSGGSELALLYLDLDRFKEVNDRFGHDIGDALLRTVAERVRSTLRQPDKAYRLGGDEFAVLLEDSQENNPQRLAERLLAALVQPIALN GERIDFVTPSIGIALYPRHAGDAEGLVRAADSAMYEAKRQRNHYCLYQAPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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