Strain | Pseudomonas aeruginosa strain AZPAE14928 AZPAE14928_contig_11, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTCAGCCAGTCGCTGGCGATCATCGACTACCTCGACGCCGTGCAGCCCGAACCGCGCCTGATCCCTCTCGACCCACTGCATCGCGCCCAGGCGCTGGAAC TGGCCCTGCTGGTGGCCTGCGACATCCATCCGCTGAACAACGTGCGGGTGCTCAAGTACCTGACCCAGGTCCTCGGCATAGACGCCGAGGACCGCCAGCG CTGGTACGCGCACTGGGTCGCCGAGGGCCTGGCGGCGGCGGAGCCCCTGCTGAACCGACACCGTCGCGGCGCCTTCTTCGCCGGCGCCGCAGCGGGCATC GTCGAGTGCTGCCTGGTACCGCAACTGGCCAACGCCCGGCGCATGGGCTGTGACCTGGCGCCCTACCCGGCGTTGCTCGAACTGGAGGGGCGCTGCCTGG CGCTCGAAGCCTTCCAGCGCGCCAGCCCCGAGCGCCAGCCCGACTACCTGCCGGACTGACGCGCTGCCCCGTGGAAAACAACAACAAGAAGGACACGCCC
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DNA Sequence for Gene |
>NS44_RS10290
ATGACCACCCGCATCCGGGCCAGCCTGCTGGCCCTGCCCCTGCTGCTGCCCTCGTTCCAGGCTATCGCCGCGCTGCCGGGGATGAACCTCGGCCAGACCT CCTTCCTCGACGGCAAGGCCCTGCCCGGCACGCTGTTCCAGCAGTTCGTGAATATCTACGAGGCCGACGACTTCATGGACGCCAACGGTCACCGGCGCCC GCTCGACAACCGCCTGCGCACCCTGCTCGCCACCAGCCACTTCGCCCACATCAGCCAGCACCAGTTGTTCGGCGCCTACTACGGCGCGGAAATCCTCGTC CCGGTGCTGCTCGCCGATCCCGACTTCGAACCCCACGCCGGCAGCGCCAACGGCCTCGGCAACCTGATCGTCAGTCCGTTCATCCTGCAATGGCCGCAGA CCGAGCTGTTCGGCCGGCCCTACTGGCAGCGCCTGAACCTCGCCTTCCAGTTACCCACCGGGCGCTACGACAGGCATCGGGCGATCAATCCCGGCAGCAA CCACTGGAGCTTCAACCCGCACTACGCGCTGACCTGGGAATTCGCCGAAGGCTGGGAAGCCAGCGCTCGCCTGCAGTACCTGTTGCCGGGCAAGAATCGC GACCCGGCGCCGCCGTTGGCCGACGACTACCTGCAGCCGGGCCAGGCGTTCCACGCCAACTACTCGGTATCGCTGGCGCTGGATGCGCATTGGCGAGTCG GGTTGTCCGGCTACAGCCTGCGACAGATCACCGACGAGCGGGTCGACGGGCACGACCGCCCGGACTCCCGCGAGCGGGTCGATGCCATCGGCCCGGCGCT GATGTTCGGCTGGGGCAAGTCGCGGCTGTTCCTCAACGCCTATCACGAATACGGCGCACGCAACCGCAGCGAGGGCAGCCGGCTGATCCTGCGCTACTCG CAGGTCTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGTCGCCTTCCGGGACGATCGGCAAGCGCTCCAGGGTGCGGAACACCGAGCTGCGCCGCCAGCGCAGGTCCGTCGGTTCCGAGGCCAGGGCGAAACGGC GACGCACCAGGCCGCGCAATGCGCATTGCAATTCGAGCCGGGCCAGGTACGCGCCCAGGCAGTAGTGCGGACCATGGGCGAACGCCACGTGCTGCTTGGC GTTCGCTCGCTGCAATTGCAGACGGTCGGGGGCGGCGAACATCTCCGGGTCGCGGTTCGCCGCGAGGAAGCTCAGCCAGACCTTCTCTCCAGGCGGAATC CGCTGGCCGCCGATCTCCACCTCCTCCAGGGTGCAACGCACGCCGCCGCGCACCGCGCCGTCGAAGCGCAGCAGTTCCTCCACCGCGTTCGCCGCCAGCT CCGGGCACCGCCGCAGCAGATCGAGCTGGTCGGGATGGGTGAGCAGCGCCAGCGTAGCGTTGCCGACCATGCTGATGGTGGTTTCGAACGCGGCCATGAA
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Amino Acid Sequence |
>hypothetical protein
MTTRIRASLLALPLLLPSFQAIAALPGMNLGQTSFLDGKALPGTLFQQFVNIYEADDFMDANGHRRPLDNRLRTLLATSHFAHISQHQLFGAYYGAEILV PVLLADPDFEPHAGSANGLGNLIVSPFILQWPQTELFGRPYWQRLNLAFQLPTGRYDRHRAINPGSNHWSFNPHYALTWEFAEGWEASARLQYLLPGKNR DPAPPLADDYLQPGQAFHANYSVSLALDAHWRVGLSGYSLRQITDERVDGHDRPDSRERVDAIGPALMFGWGKSRLFLNAYHEYGARNRSEGSRLILRYS QVF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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