Strain | Pseudomonas aeruginosa strain AZPAE14928 AZPAE14928_contig_11, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCGCCAGCCTCGGACTGGCGTTCTGGCTGCTTGGCAGCCTGGGCCTGGGCATCTACGAGCGCGGTACGCGCCTGCCCGAGCTGAGCCTGCGCAACGCCG CCGGCGAGTCGGTGCAACTGGCCGATTTCCGGGGCCGCCCGCTGGTGATCAACCTCTGGGCCAGCTGGTGCCCGCCGTGTCGGCGCGAGATGCCGGTGCT GCAACAGGCGCAGGCGGAGAATCCCGACGTAGTGTTCCTCTTCGCCAACCAGGGCGAGAGCGCCGAGACCGTGCGCCATTTCCTCCAGGGCGAGAACCTG CGCCTGGACAACCTGCTGTTCGACAACGGCGGGCAGCTTGGCCAGCAGGTCGGCTCGGTCGCCTTGCCCACCACCGTTTTCTACACCGCCGAGGGCCGCC TGCTGGGCAGCCATCTCGGCGAACTGTCCCGCGGCAGCCTGGCGCGCTACCTCGAAGCCTTCGAGCCGGCCGCTGCCGCCCCCGCAACCAGGAGTTCCGA
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DNA Sequence for Gene |
>NS44_RS10280
ATGAGACTGCCGCGCAACCTGATCACCCTTGGCCTGGGCCTGACCCTCCTCAACGCCGGCCTGGCCACGGCGGCGGAGGAGTTGCCGGCGCCGATCCGCA TGGTCCAGGAGAAGGGCGCCCGCATCCTCGGCAGCTTCGACGCCCCGGATGGCCTGCGCGGCTACGCCGCCGAATACCAGAACCAGGGCATGGCGCTGTA CCTGACGCCCGACGGCAAGCACGTACTCACCGGCCACCTGTTCGACGCCCAGGGCAAGGACCTCAGCCGCGAACCGCTGGAGCGCCTGGTGTATGCGCCG CTGGCCAAGGAAATGTGGCAGAAGATGGAGCAGAGCGCCTGGATCGCCGATGGCCGTGCCGACGCGCCGCGCGTGGTCTACCTGTTCAGCGACCCGAACT GCCCGTACTGCACCATGTTCTGGGAGCAGGCGCGACCCTGGGTGGATGCCGGCAAGGTGCAGTTGCGGCATATCATGGTCGGCATCATCCGCGAGGACAG CGAAGCCAAGTCCGCTGCGCTGCTGGCCAGCAAGGACCCGCAGAAGGCCCTGCACGACCATGAGCAGGCGGGCAAGGCCAGCACCCTGAAGCCGCTGGCG AAGATCCCGGCGGCGGTGCGCAAGCAGCTCGCCGGCAACATGGAACTGATGGAGTCGATGGGCGCCGCGGCGACCCCGGCGATCTTCTATCTCAATGCCG AGGGGCGCATGCAGCAGCAACAGGGCGCGCCGCAGCCGGACCAGTTGGCGGAGATCCTCGGTCCGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCTCCGGGCCGGCGCCGAGCCGCCGGCCATCTATACTCCCTGCGTTACGCCAACCCAGCGGAGCAAGGGCCATGGACGACGCATTCAGCGAGGAAGGCA GCGCGCAGCCGCGCCATGACGCTCAGCGTCCGGCGCTCGCCCCGCGGAGCGACGGTTTCGACATCCACACCTACCATCCCGACTTCGTCGCCGATCCCTA TCCGCTGTTGCGGCTGATCCGTTCCCGTGCGCCGGTCTGCCGCGACCAGGCCTCGATCTGGTGGATCAGTCGCTATGCCGATGTCTCGGCGTGCCTGCGC GACCGCCGTTTCTCCGCCGACCCCGCTCGCCTTGGCGCCGCCGGCGTCCGCCAGGGCGGCGCCAGCTGGTTCGGCCACCAGCAATTGCAACCGCTGGCGC GCTTCTACGACAACTTCATGCTGTTCAACGACGCGCCGCGGCACACCCGCCTGCGCAGGCTGTTCGCTCCGGCCTTCGGCCCCGACGCCGTGCGCCGCTG
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Amino Acid Sequence |
>dihydroneopterin aldolase
MRLPRNLITLGLGLTLLNAGLATAAEELPAPIRMVQEKGARILGSFDAPDGLRGYAAEYQNQGMALYLTPDGKHVLTGHLFDAQGKDLSREPLERLVYAP LAKEMWQKMEQSAWIADGRADAPRVVYLFSDPNCPYCTMFWEQARPWVDAGKVQLRHIMVGIIREDSEAKSAALLASKDPQKALHDHEQAGKASTLKPLA KIPAAVRKQLAGNMELMESMGAAATPAIFYLNAEGRMQQQQGAPQPDQLAEILGPR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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