Strain | Pseudomonas aeruginosa strain AZPAE15026 AZPAE15026_contig_7, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATAGCGCATGGACTTGCGGCAGGCCAGGGTGAACTCCACCGGCCACATGCGATCGCCCAGCGCCAGGGTGGTGCGGATCACGTAGCGGGTCTGGGCCTGG CCGTTGGAGCTGCGAATGGTCTTGCGCGCGACCATCGGCGCTTCGCAACGGTGCCGGCGCTGTACCAGCGTGCCGAGGTGGGCGGTGAAGCGCACCCACT TCTCGCCGTCGCGCTCGAAGGGAACGATGTCCGAGGCATGCAGGCTGGAGGTGCTGGCGCCGGTGTCGATCTTCGCGCGCAGCCCGACCATGCCCAGTTC GGGAAAGGCGATCCACTCGCGCAGACCGATGACGGAAAGCTGGTCGAATGTCTTCACGGGTAGGCATTCCAGGCGTTTTGCCGGCATTCTAGCAGGGCTA TGGGCGGCCGCCAGACGGCTGCCCGAGGATGCCGAAGACGAACCTAGCGGCTGTCGATGACAGTCGCGAGACAGCGGCGGAACGAATACGGGAAATGCCA
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DNA Sequence for Gene |
>NT42_RS08730
GTGAGCGAGAAAGACGACGACAAGGTGCGCCTGGACAAGTGGCTCTGGGCGGCGCGCTTCTTCAAGACCCGGGCGTTGGCCAAGGCCGCGATAGAGGGCG GCAAGGTGCATTGCCGGGGCGAGCGGTGCAAGCCGAGCAAGGAACCCAGGGTAGGGGAGGAATTGACCATTCGTACGGGCTTCGACGAGCGAACCGTGAC GATTCGCGCGCTTTCCGTAGTCCGTCGTGGCGCGCCGGAGGCCCAGGCTCTCTACGAGGAAACCGCGGACAGCGTGGAAAGCCGCGAGCGCGCGGCGGCC ATGCGCAAGGCCGGGGCGCTGGGCGTACAGACCGAGGGGCGGCCGAGCAAGAAGCAGCGGCGGCAGATCCACCAGTTGCGCGGCGGCCAGGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GAAGCGCCGGTCTCCCGCAGGGGAGACCGGGATGGCCTCAGGCCGAGTCGCGGACCACGCCGAGGCGGCCGATCAGCGGCAATTTCGCCAGCAGGCGGAA CAGCGGTTCGGTCACCTGCACCAGCCAGCCGCTGGCCTTCGCCGCCAGCGGTGTGTAGCAGCCCCAGGCGAGGGCCAGCAGGGCCATCTGCAGGCCGCCG ATGTAGTCGTCCTGGCCCCAGTGCGCGCCGGCTACCAGGCGCGGCAGCATGAACAGCACGGCCAGGGTCCAGATCAGCAGGAACTGCCCGGCGCGGCGGG CGAACAGCGACATGAACAGCGCCCAGACCAGCAGCACCGAGGCGTGGTCGCCGGGGAAGCTGCGCTTGGAGCGGTCCTTGATTTCCCACACGCGTTCCCA GTCCGGGAAGTGGTCGCTGAGGTGGATGGCCTTGTCCATCAGCATCGACAGGCTGGCGTGCTGCCAGTGCAGGTGGTGGGCGATCTTGGCGTAGAGCACG
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Amino Acid Sequence |
>RNA-binding protein S4
MSEKDDDKVRLDKWLWAARFFKTRALAKAAIEGGKVHCRGERCKPSKEPRVGEELTIRTGFDERTVTIRALSVVRRGAPEAQALYEETADSVESRERAAA MRKAGALGVQTEGRPSKKQRRQIHQLRGGQD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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