Pseudomonas aeruginosa AZPAE15026, NT42_RS08585
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE15026 AZPAE15026_contig_7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGCTTCGCCCTGGGCCTCGGCCTGAGCCTGGACGACGGAGTCCTGCCCGACGCCGCCGACGAGCCGCACAACCTCAGCGCCAAGGTCGAGGCCTTCGA ACGCTCGCTGATCGCCGCCGAGCTGGAACGCCCGCACAATTCGCTGCGCAGCGTCGCCGAGGCCCTCGGTATCCCGCGCAAGACCCTGCACGACAAGCTG CGCAAGCACGGCCTGCCGTTCAACACGCCTGGCGAGAATCCGCCAGATGATGGCGAATGAATGGCGGAATACCGCCAGCCGTTCGCCATTCGCGCCCGCA GCATCTCCCCTGCACGCCCTTGCCCGACTGGCACAGGGCTTGCTCACTGCTTCCCGAGCGTTCCAACAAGCAGAAGACCAGGCGCTTTTCCGATTCACGC AGCATCTGCCGCTGCGCTGCCTAGACTTCCCTTGTTCGGCCACGCCGAGAGGACATCTGTCCTCTTCATAAAAGACAGACAAGAACAAAGAGGAAGTCTC
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| DNA Sequence for Gene |
>NT42_RS08585
ATGCTCAAGCACACCGCGAAGGCGCTCGTCTGCGCACTTTCCCTGACCGTCGCCGGAATCGTCCAGGCGGCCGACCCGATCGTCATCAAGTTCTCCCACG TCGTCGCCGAGCACACGCCTAAGGGCCAGGGCGCGCTGCTGTTCAAGAAACTGGTGGAGGAACGCCTGCCGGGCAAGGTCAAGGTGGAGGTCTACCCGAA CTCGTCGCTGTTCGGCGACGGCAAGGAAATGGAGGCCCTGCTGCTGGGCGACGTGCAGATCATCGCGCCGTCGCTGGCCAAGTTCGAGCAGTACACCAAG AAACTGCAGATCTTCGACCTGCCGTTCCTGTTCGACAACATCCAGGCGGTCGACCGCTTCCAGCAGAGCCCGCAGGGCAAGGAGCTGCTGACCTCGATGC AGGACAAGGGCATCACCGGCCTCGGCTACTGGCACAACGGGATGAAGCAACTGTCCGCCAACAAGCCCCTGCGCGAGCCGAAGGACGCCCGCGGCCTGAA GTTCCGCGTGCAGGCCTCCAAGGTGCTCGAGGAACAGTTCAAGGCGGTGCGCGCCAACCCGCGCAAGATGAGCTTCGCCGAGGTCTACCAGGGCCTGCAG ACCGGCGTGGTCAACGGTACCGAGAACCCCTGGTCGAACATCTACTCGCAGAAGATGCACGAAGTGCAGAAGTACATCACCGAATCCGACCACGGCGTGC TGGACTACATGGTGATCACCAACACCAAGTTCTGGAACGGCCTGCCGGAAGACGTGCGCGGCGTTCTGGCCAAGACCATGGACGAGGTGACCGTGGAGGT GAACAAGCAGGCCGAGGCGCTCAACCAGGGCGACAAGCAGCGCATCGTCGAGGCCAAGACCAGCGAGATCATCGAACTCACTCCCGAACAGCGGGCCGAA TGGCGCAAGGCCATGCAGCCGGTGTGGAAGAAGTTCGAAGGTGAGATCGGCGCCGACCTGATCAAGGCCGCCGAAGCCGCCAACCAGGCTCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAAGAAGAGGGAAAGCCCATGCACGCGCTCGCGCGCGTCTGGGCGCGCCTGGAGGAAGGCCTGATCGCCTTCCTCCTCGCCGCCATGACGCTGGTTACCT TCGTTTATGTGGTCCTCAACAACCTCTACACGCTGTTCTACGATCTCGCCGACCTCTGGGAGGGCGGCAACGAGACGCTGCTCGCCATCGGCGACGCCAT CCTCAGCCTGGCCCAGGAGATGACCTGGAGCAACGCCCTGACCAAGGCCCTGTTCGCCTGGCTGATCTTCCTCGGCATCGCCTACGGCGTACGCACCGCC GGGCACCTCGGCGTGGACGTGCTGGTGAAGCTGGCTTCGCGGCCGGTACAGCGGGTCCTCGGCGTGATCGCCTGCCTGGCCTGCCTCGGCTACGCCGGCC TGCTCTGCGTGGCCAGCTACGACTGGGTGAAGACCCTGTTCATCGCCGGCATCGGCGCCGAGGACCTCGACCACTTCGGCATCCGCCAATGGCACATCGG
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| Amino Acid Sequence |
>C4-dicarboxylate ABC transporter
MLKHTAKALVCALSLTVAGIVQAADPIVIKFSHVVAEHTPKGQGALLFKKLVEERLPGKVKVEVYPNSSLFGDGKEMEALLLGDVQIIAPSLAKFEQYTK KLQIFDLPFLFDNIQAVDRFQQSPQGKELLTSMQDKGITGLGYWHNGMKQLSANKPLREPKDARGLKFRVQASKVLEEQFKAVRANPRKMSFAEVYQGLQ TGVVNGTENPWSNIYSQKMHEVQKYITESDHGVLDYMVITNTKFWNGLPEDVRGVLAKTMDEVTVEVNKQAEALNQGDKQRIVEAKTSEIIELTPEQRAE WRKAMQPVWKKFEGEIGADLIKAAEAANQAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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