Pseudomonas aeruginosa AZPAE15026, NT42_RS28315

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE15026 AZPAE15026_contig_34, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAAGCGCTCGACTTCCTCGACCTGCGGCGTGGCTACGAGCCGCTGCTGGACTGGCTGGAGCGCGCCATCGAGTCGATCCGCGCGGGCTACCGCTGCCTGC CGTTCGAGCAGGAGGAACAGGTATTTTCCGTGCGCCTGCCCGATCCGGCGCCGCGCCAGCGCCTGGTGGTCGGCCTGCGGATGCCCGCCGGCGCCGGCGA ACAAGCGGCGGCTGACTGGCTGGAGCGCGCCATCGTCGCCTCCGACCCGCACCTGCCGTTGCTCGCCCGGCAGCGCATGAGCGGGCTGGCGCGGCAGCCG ATGAATCGCCAGGAACAGGTGGCCTACAGCGTCGGCGACGACACCCGTTTGTTCGTCGTGCAGGGCGCCGGCGACTGGTTCGATGCCGGCCAGCCGCTGC GCATCGTCGCGCCGGTCAGCGGGGTTGCCAGCAGTCCCTGGCAGATCGTGCTGTTCGTCGCCGACGGCAGCGACAACACCTAGACAGGAAGGAGCCGCCA
DNA Sequence for Gene
>NT42_RS28315
ATGCCCGAAGGGAGTGCAGGGCCTTTTTCCCAGGCGTACCAGGAGCAGCCGCTCAGCACGGCATTCCGCCAGGCCTGGCAGGAATGGCTGGAGGCCTGGG GCGCCCTCGACCGCGACGCCCAGGATGTGCCACGGATGGTCGAGCGCGCCCTCGAACTGTCCACCCGCATCACCCGGCGTCTGTGGCGCAGCGCCTTCGC CAGCGTCGGCGACGCGGCGGGCGTGCAGGTCAAGGCGATGGTCTATGCCTTCGTCGCCCTGGTCGACGAGACTCTGGTCTTCAGCGCCTGGCCGGGGCAG GGCGCCTGGCAGGAAAAACCGCTGGAGTCGCATCTCTACGGCAGTCGCCAGGCGGGCGAATACCTGCCGCTGGCGATCAAGCGCCTGCTCGACGAACGCG CCCCGGCCAGTCGCGACCTGGCCAACGTCTACCTGCAATGCCTGATCCTCGGCTTCCGCGGTCGCCTGCGCGGGCCGCGCGGCGAGGCGCTGCACGAGAA GTGGCGGCAGGCGCTGTTCGCCTTCGCCTGGCAGCGCGAGGCGGACGCCGCCGACCTCGGCCGCCGCCTGGAGCAGCCCGCCGCCGCGCCGCCACGGCGC CTGCCGGTGCGCGCGGCGCTGCCGGACGGTTTCCGCCTGGGCCTGGCGGTGCTCGGCCTGGTGCTGCTGATGAGCGGCATCGGGCACCTGTTCTGGCGCG ACATCCAGCATGAAATGGCGGCGGTGACCCACCTGGCCGATGCGGAGCAGGCGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGCGCGACGCTGTTCATGCTGGTTCTCCTCCTGGTGCTGGTGGTGCTGCTGCTGGGGGCGCTGGGCTGGTGGTGGCGAACCCGCGGTGGTACGGAGAT CCGCAGCTTCTACGCGGCGGTCCGGCAGATGGAGCGCGAGCAGGGCTGGCAGGGCCGCTACGAAGCGCCGTGGTTGCTGATGCTCGGCAACGAGACCGAG GGCGAGCAGTTGTGCGCCACCTGGCGCCTGCTGCCGGTGGCGCGCCCGGCCTGGTTCGGGCGCTGGTGGTCGGACGGCGAGGGGGCGATCCTGCTGGTGC CCGAGTCGGTGTTCCTGCCCGACGAGGGCCTGCGCCGGCAAAGCGGCGCCTGGCTGCGCCTGTTGCGTCTGTTCCTGCGCCTGCGCGGCAGGCGCGCGCT GGACGGAGTGGTCTGGAACATTCCGCTGGCGCGGCTGCAGGATGGCGAGCAGGCGGCCAACCTCGGCCTCGCCGCCCGTCGTCGCTACGTGGAACTGACC
Amino Acid Sequence
>type VI secretion system protein ImpK
MPEGSAGPFSQAYQEQPLSTAFRQAWQEWLEAWGALDRDAQDVPRMVERALELSTRITRRLWRSAFASVGDAAGVQVKAMVYAFVALVDETLVFSAWPGQ GAWQEKPLESHLYGSRQAGEYLPLAIKRLLDERAPASRDLANVYLQCLILGFRGRLRGPRGEALHEKWRQALFAFAWQREADAADLGRRLEQPAAAPPRR LPVRAALPDGFRLGLAVLGLVLLMSGIGHLFWRDIQHEMAAVTHLADAEQAP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site