Pseudomonas aeruginosa AZPAE15026, NT42_RS24760

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE15026 AZPAE15026_contig_26, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGCGGCAGTGCATCGGCGGCTTGCAGCAGAGCCTGCGGACCCGCAGCGAACTGAAGAACGAACTGCGCCTGTCGCTGAGCACGTTGCGCGATACCGGCA AGAATCCCTTGCGCTTCAGCGCCGATGCCGGCGAGGCGCTGGGTCATCTGCTACGGGATGGCAAGCCTGGCCAGTTGAGTGGCGAACAGGCCGTCGCACG CAGTTTCCGCGACCTCCAGGCGCACCAGGTGGCGCTGCTCGGCGCCAGCCGGGCGGCGGTGCGCGCGACCCTCGAGCATTTCTCGCCGCAGCAGCTGACC CTGCGTTTCGAGCGCGACGGCCGCCGGCCGTTGCTGGCCACCTCGGGCAGCCGCTGGCGTGCCTATGGTCGCTACCACCAGTCGCTATGCCAGGACGACG ACTGGAGCGAGCGCCTGCTGGCACGTGATTTCGCCCAGGCCTACGAAGAGCAGGTTCGCCTGATTTCCACCCTCTACACCGAGCACCAAGGATGATCGCC
DNA Sequence for Gene
>NT42_RS24760
ATGTCTCGTCGCCCGATTCCGCCAGCCAGGGCGCTGGCCATGCTCGCCGTCCTGGCGCTGCTGGCCGGCTGTTCCACGCTGTCGCCGTATTCCAGACTGA CCAAGCTCGACCTCGCCCTGAGCGCCGGCGAGCGGGTCAATCCCGACCTCAATGGCCGGCCGTCGCCGGTGGTAGTGCGGCTGTTCGAGCTGAAGCACCC GGTGGCGTTCGAGAACGCCGACTTCTTCAGCCTCTACGAACGTCCCAAGGAGACCCTGGCCCCCGACCTGGTGACCAGCGAGGAGCTGGAGCTGCGGCCC GGCGAGCGGGTCGAACTCAAGCTCAGCGTGGAGGAGGGGAGCCGCTACGTGGGCGTGCTCGCCGCCTACCGCGATCTCGGCGAGGCAAGCTGGCGCTACG TGGTGCCGGTCACGGCGAAAGAGCTGACCCGGGTAGAGCTGAAGCTGGGCCGGAAGGGCATCCTGAATGCCGGCGAACTGCTCGGCAAGGCGGGTGACGC GCGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGTGCACAAGATCGTCTGGCAGGAAGGCATGCTGCTGCGCCCGCAGCACCTGCAACACAACGACCGCTACTACGACAACCAGATGAAGGCCCGGACCCA GTTGCTGGGCAGCTACAACTGGGGCTTCCTCGCCCTGGAGCTGGACCGCCAGTTCCTCAACATGGGCAAGCTGGTGATCAGCCAGGCCTCCGGCGTACTG CCCGACGGCAGCCTGTTCGAACTCGGCGGCAACACCGAGCCGCTCGCCCTCGACGTGCCGCCCAATACCTCGAACGTGCCGATCTACCTGGCCCTGCCGC TGGTCACCGGTAACCACATCGAGGCGCGCCGGCCGGAGCAGGCCGAGGTCCTGGCGCGCTATACCGCCTACGATCTGGAGGTGGCGGACTCCAACGCCGG CGAGGATTCCATGGTGCAGGTCAGCTGCGCGCGGCCGGATTTTCGCCTGCTGCTCGGCGAGCAGCAGAGCGACCAGGCCTACGTCAAACTGAAGGTGGCG
Amino Acid Sequence
>type VI secretion protein
MSRRPIPPARALAMLAVLALLAGCSTLSPYSRLTKLDLALSAGERVNPDLNGRPSPVVVRLFELKHPVAFENADFFSLYERPKETLAPDLVTSEELELRP GERVELKLSVEEGSRYVGVLAAYRDLGEASWRYVVPVTAKELTRVELKLGRKGILNAGELLGKAGDAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site