Pseudomonas aeruginosa AZPAE15026, NT42_RS24060
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE15026 AZPAE15026_contig_26, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGAGAGATCGAGGAGATACTGCAGCGCTACCGATGAGAGCGTCGACGGCCTGCGAAAAATGGCGGGCCTGAAATGGAGGCGGCCCCGCCAGTAGCATCCT AACGCCGGCAAGGCATCACCCGACACCAACTGGTATTGACCTGCCCCCCGATTTCAGTACCACGTCAAACTTAGTAGAGTCCGTTTTCCGAGCAGGAGAC GGCAGTGAAAAAGCGTTTTACCGAAGAACAGATTCTCGACTTCCTCAAGCAGGCGGAGGCCGGTGTGCCGGTGAAGGAACTGTGTCGCCGACACGGCTTC AGTGATGCCTCGTTCTACACCTGGCGGGCCAAGTTTGGCGGTATGACCGTGGCGGACGCCAAACGGTTGAAGGATCTTGAACTGGAAAACAGCCGATTAA AGAAGTTGCTCGCCGAGGCCCACCTCGACATCGAGTCGCTGAAAGTGGTCGCCCGGGGAAAAGGGTAAGCCCGACAGCACGGCGGAAGGCGGTGCAGGAG
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| DNA Sequence for Gene |
>NT42_RS24060
ATGCAGGCGCGAGCCGGCATCTCCGAGCGTCGTGCCTGCCAGTTGATCGGGCTGTTCCGCTCGGTGTTGCGCTACCAGCCGCGAGCCAGTGTGCAAAACA CCGAGCTGCAAGCCCAACTGGTGGAACTGGCCCAAGAGCGCCGGCGCTTTGGCTATCGCCGCCTGCACATCCTGCTGCGGCGTGCTGGCGTGCAGGTCAA CCACAAGCGGATCTATCGCCTGTACCGCGCTGCCGGCTTGATGGTGAAACGGCGGCGGCGCCGCCATGGCGTCGCGGTGGAGCGCGAACGTCTGAGCTTG CCGAGCGCACCAAACCAGGTCTGGTCGATGGACTTCGTCTTCGATGCACTGAACACCGGGCGGCGGATCAAATGCCTGACGGTGGTCGATGACTTCACCA AGGAGTCGGTCGGCATCCTGGTGGAGCACGGTATCAGTGGCTTTCGCGTCACACGGGCGCTGGACGAGATGGCGCGGTTTCGCCGCTACCCGAAAGCGAT CCGCACCGACCAGGGGCCCGAGTTCACCGGCAAGGCACTCGATCAATGGGCCTATCAGCGCGACATCAAGCTGAAGCTGATTCAGCCTGGTAAGCCCACG CAGAATGCCTTCATCGAGTCGTTCAACGGTAAGTTCCGGGACGAATGCCTCAATGAGCACTGGTTCTGTTCGCTGGCCGAAGCGAGAATCCGCATCGCGG CCTGGCGGCGGGATTACAACGAACACCGACCGCACAGCGCGATTGGCAATCTCACCCCGGCAGAATTTGCTGCAAGTTGGCGAACTCGCCAGCAGCAGCT GAAGCAGGAAAAATTAATATCAACCCCAGGGCCTACTAACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAGCGGTACTAAAACTGGGGGCAGGTCAAACCGACCAGAGCTGCTCTCCCTGCTCAACAATGCTCAGAGTGGTGACGTGCTACTAGTCGAGTCTGTAGA CCGCCTCAGTCGACTCTCACAGGCTGATTGGGACACTCTCAAGGCGACTATCAAGGCCAAGGGGTTGCGTCTGGTTGTAGCTGATTTACCTACAAGTCAC ATGCTGGTCGAAGCGAATGGAATCACCGGGCAAATCATGGATGTGATCAACAACATGCTGATTGATTTGATGGCCACCATGGCACGATTGGATCAAGAGA AACGCGTGGAACGCATCAAACAGGGTTTGGAGAACAAAAAGGCTGCTAACCCTGATTGGAAGCCATCCGGAAAGGGAAGGAACGCAGCAAAGTGGGCAAA GGTACAGACGCTGATGCAGGAGCATCCAACCATGTCTGCTGACAACATCGCTAAACTGGCTGATTGTGGTGTCGCTACGGTGTACAGGATCAAGAAAGAA
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| Amino Acid Sequence |
>transposase
MQARAGISERRACQLIGLFRSVLRYQPRASVQNTELQAQLVELAQERRRFGYRRLHILLRRAGVQVNHKRIYRLYRAAGLMVKRRRRRHGVAVERERLSL PSAPNQVWSMDFVFDALNTGRRIKCLTVVDDFTKESVGILVEHGISGFRVTRALDEMARFRRYPKAIRTDQGPEFTGKALDQWAYQRDIKLKLIQPGKPT QNAFIESFNGKFRDECLNEHWFCSLAEARIRIAAWRRDYNEHRPHSAIGNLTPAEFAASWRTRQQQLKQEKLISTPGPTN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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