Strain | Pseudomonas aeruginosa strain AZPAE15026 AZPAE15026_contig_24, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTCCAGTTCGTGCAGCGGTTGGTCGCTTTCCGCTTCCAGTTCGAACCAGCGGGAGGCATCGTTGAAGACCTTCAGCGGGCGCATGCGTCCACGCGCGACG CCGGCCTTCTGGTAGAGGTCCTGCTGTTCCATGTAGAACAGCGACCAGCCGCGGGCCTGGGCAGCCAGCAGCATGGCGAGCGAGCTGTCCTTCTTGAAGT TGATGCGTGCGATGGGGTCCATGACGATCCCGAGGCGTACGCTCATGGGAATTCCTCCGAAAGGGGGTGGGTTGTCCGGTCGCGGCGGGGAGGCCGCGTG GCAAGCGGGTTTGACGCTCAGGTTGGCGCCCCGTTTGCGCTTGGTCAAGGAAAAAGCCGGCCTGTTCCGGGCATTATGGATAGAGTTGCGTCGAGTGTGC TAAAAAGGCCCGCGATTGGGTCGCAGCCCGTCGGTGACAGGGCGTTAGCGCACTGAAGAAAACACAGAAGAATGATTCACCGAGTCGATATAGGGCGAAC
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DNA Sequence for Gene |
>NT42_RS23525
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCTGAAAAAGGTCGGTTGCGACG TGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTA TCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAGTCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGC ATCGTCGGCTCCGACCAGTACCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG TTTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TATCCGGCCGCATGGCCGTTGATGCTTATTTCGTGATGGGGATCCCATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACC GCCATGCTGGAAAAGCATGGTCACCAGGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGG ACATCGTCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATCGTCACCACCAAGGA CCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGACGAAGAGACCCTGCTGAAAACCATCAATGCGGTG CTGGCGGGCTGAGCCCGTCGCAGCGCATCGCTCACCCTGACCCCGGAAAGACCAGGCCCCGCATGTCGGACGTTCAGACCCCCTTCCAGCTCCTCGTCGA
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Amino Acid Sequence |
>pilus response regulator PilG
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFKSTPVIMLSSKDGLFDKAKGR IVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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