Pseudomonas aeruginosa AZPAE15026, NT42_RS22715
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE15026 AZPAE15026_contig_24, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGCGCTGGCGGAGCGGAATCCGATGGACGTGGCGCTCTGCTCGCCGCCTGAGCGTGGGAAGGCACTTATCAGGCACTTCCGAAGGCACTACCGGACGA TATCGATTCCATCGCCAACGCGGTAACTTCGAAGCACTTAAACCTTCATGAAACTGTAACTTCCAACTCGATCGACAGCTCTGGAAATACATCCTCGGTA GTTTCCAAGACCCTAACCAAAGTCTGGATCGTTTCGTCACAGGAAACGCTGGAGCGCCTATTCCAGAGCGCTTCGAACAATCGGTAAAAATAAAATCCAA ATAATCAGACGCAGTTCAAAAACAACCAGAACAGATAGTTTTTCCGCCTTTCCCAACATGCTCCTCTCGCCTTGACTCGTTCGATGCAGCGGATCGCCCA TGCGTATTTCCGGCATTGTCCGAGGCCCATTCCCTGTTCGACGCGATACCCGGCGCACCCATAACAATATGCCGCCCTCCACGGGCCGATAGCGCCAGTT
|
|
| DNA Sequence for Gene |
>NT42_RS22715
GTGAGCTTGTCCACCACTGCATTTCCCTCACTGCAAGGAGAGAACATGAGTCGCTCACCCATCCCTCGCCACCGAGCGTTGCTGGCCGGTTTCTGCCTGG CTGGCGCGCTGTCCGCCCAGGCGGCCACCCAGGAAGAAATCCTCGATGCGGCACTGGTCAGCGGGGATTCCTCGCAACTGACCGACAGCCACCTGGTCGC CCTCCGCCTGCAGCAGCAGGTCGAGCGCATCCGCCAGACCCGCACGCAGTTGCTCGACGGTCTCTACCAGAACCTCAGCCAAGCCTATGATCCTGGCGCC GCCAGCATGTGGGTCCTGCCGGCCAACCCGGACAATACCCTGCCCTTCCTCATCGGCGACAAGGGCCGCGTGCTCGCCAGCCTGAGCCTGGAGGCCGGCG GCCGCGGGCTGGCCTATGGCACCAACGTGCTCACCCAACTGAGCGGGGCCAATGCCGCCCACGCACCGCTGCTGAAGCGGGCGGTGCAGTGGCTGGTGAA CGGCGACCCGGGCGCGGCCACTGCGAAGGACTTCAAGGTCAGCGTGGTCGGGGTGGACAAGACCGCCACCCTCAACGGCCTGAAGAGCGCCGGCCTGCAA CCGGCGGACGCCGCCTGCAACGCGCTGACCGACGCCAGTTGCGCCAGCGCCAGCAAATTGCTGGTACTGGGCAACGGCGCCAGCGCCGCTAGCCTGAGCG CCACGGTGCGCGCACGGCTACAGGCCGGGCTGCCGATCCTCTTCGTGCACACCAATGGCTGGAACCAGAGCAGCACCGGCCAGCAGATCCTCTCCGGCCT GGGCCTGCAGGAAGGCCCCTACGGCGGCAACTACTGGGACAAGGACGCGGTGCCATCCAGCCGCACCCGGGCGCGTTCGGTCGAGCTGGGCGGTGCCTAC GGCCAGGATCCGGCGCTGGTGCAGCAGATCGTCGACGGTAGCTGGCGCACGGACTACGACTGGTCGAAATGCACCTCCTACGTCGGTCGCACCACCTGCG ACGACGTGCCGGGACTGAGCGACTTCAGCAAGCGCGTCGATGTATTGAAAGGCGCCCTCGACGCCTACAACCAGAAGGCGCAGAACCTCTTCGCCCTGCC CGGCACCACCTCGCTGCGGCTCTGGCTGCTGTGGGCCGACGCGGTGCGGCAGAACATCCGCTACCCGATGGACAAGGCCGCCGACACGGCGCGCTTCCAG GAAACCTTCGTCGCCGACGCCATCGTCGGCTACGTGCGCGAGGCCGGCGCGGCGCAGAAGGAACTGGGCAGCTACGCCGGCCAGCGCCAACAGTCGATGC CGGTATCGGGCTCGGAGGAAACCCTGACCCTCACCTTGCCGTCGGCCCAGGGCTTCACCGCCATCGGCCGCATGGCGGCGCCGGGCAAGCGCCTGAGCAT TCGCATCGAAGACGCTGGCCAGGCCAGCCTGGCGGTCGGCCTGAACACCCAGCGCATCGGCTCGACGCGGCTGTGGAATACCCGCCAGTATGACCGCCCG CGCTTCCTCAAGAGCCCGGACATCAAGCTCCAGGCAAACCAGTCGGTGGCGCTGGTATCGCCCTACGGCGGCCTGTTGCAACTGGTCTACAGCGGCGCCA CGCCGGGACAGACGGTAACCGTCAAGGTAACCGGCGCGGCCAGCCAGCCGTTCCTCGACATCCAGCCGGGCGAGGACAGCAGCCAGGCGATTGCCGACTT CATCCAGGCGCTGGACGCCGACAAGGCCGACTGGCTGGAGATCCGCAGCGGCTCGGTGGAGGTCCATGCCAAGGTGGAGAAGGTCCGTGGCTCGATCGAC AAGGACTATGGCGGCGACGTCCAGCGCTTCATCCGTGAGTTGAACGAGGTGTTCATCGACGACGCCTACACCCTGGCCGGCTTCGCCATTCCCAACCAGG CGAAGACTCCGGCAATCCAGCAGGAATGCGCGGTGCGCGGCTGGGACTGCGACAGCGAGACCCTGCACAAGCTGCCCGGCACCCAGCACATCAACGTCGA CCAGTACGCCCAGTGCGGCGGCGGTTGCAGCGGCAACCCCTACGACCAGACCTGGGGCCTGAACCCGCGTGGCTGGGGCGAAAGCCATGAGCTGGGCCAC AACCTGCAAGTGAATCGACTGAAGGTCTACGGCGGGCGCTCGGGCGAAATCTCCAACCAGATATTTCCGTTGCACAAGGACTGGCGCGTGCTCCGCGAGT TCGGGCAGAACCTCGACGATACGCGGGTCAACTACCGCAACGCCTACAACCTGATCGTCGCCGGACGCGCCGAGGCCGATCCGCTGGCAGGCGTATACAA GCGCCTGTGGGAAGACCCGGGCACCTACGCGCTGAACGGCGAGCGAATGGCCTTCTATACCCAGTGGGTGCACTACTGGGCCGACCTGAAGAACGATCCG CTGCAGGGTTGGGATATCTGGACCCTGCTCTACCTGCACCAGCGCCAGGTGGACAAGTCCGACTGGGACGCCAACAAGGCCGCTCTCGGCTACGGCACCT ACGCCCAGCGCCCGGGAAACAGCGGCGATGCCAGCAGCACGGACGGCAACGACAACCTGTTGCTCGGCCTGTCCTGGCTGACCCAGCGCGACCAGCGGCC AACCTTCGCGCTATGGGGCATCCGTACCTCGGCAGCGGCCCAGGCTCAGGTGGCGGCCTACGGTTTCGCCGAGCAGCCGGCGTTCTTCTATGCCAACAAC CGGACCAACGAATACAGCACGGTGAAGCTTCTGGACATGAGCCAGGGGTCGCCGGCGTGGCCGTTTCCGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTCGTAGCTGAGGGGGCTGGCGCGGGGTGATGCTTCTCGCTCCGCGCCGGTCCTCATCCCCCTCTCCCCGACGGGAGAGAGGGTCGGCCATGCCAGCGGG CAATGCCGTGCCAGGCTGGCAAGCCAAACTGTCGTTCAAGCTGAACGATCCTGCGCAATAATGAGCCCCTTCCACCAGCAAGGACCGCTCATGACCGACC GCCTTCCCTGCCGCGCCTGCGGCCATCTCATCCTGCCGACCACGGCGGCGAGGAACGACGGACTGTGCATGCCCTGCAAGGGCGGCTACCGGCAGAACAT CGAGGATGGCAAGCGTTTCCACACGGAGCGACGGCGCTACCTGGCGAGTCCGCAGGCGCTGTACTGGAGCGCGCTGGTGAATCGCGTCTACGATGGCCGC GAGGGATTCGCCGGGCTGTCGCCGGCCGAACGGAGCTACTACGCAGTGAGCGTGCTCAGCGGCGAAGTGCACAACGGCGGCTTCGACCAGTACTTCGGCA
|
|
| Amino Acid Sequence |
>hypothetical protein
MSLSTTAFPSLQGENMSRSPIPRHRALLAGFCLAGALSAQAATQEEILDAALVSGDSSQLTDSHLVALRLQQQVERIRQTRTQLLDGLYQNLSQAYDPGA ASMWVLPANPDNTLPFLIGDKGRVLASLSLEAGGRGLAYGTNVLTQLSGANAAHAPLLKRAVQWLVNGDPGAATAKDFKVSVVGVDKTATLNGLKSAGLQ PADAACNALTDASCASASKLLVLGNGASAASLSATVRARLQAGLPILFVHTNGWNQSSTGQQILSGLGLQEGPYGGNYWDKDAVPSSRTRARSVELGGAY GQDPALVQQIVDGSWRTDYDWSKCTSYVGRTTCDDVPGLSDFSKRVDVLKGALDAYNQKAQNLFALPGTTSLRLWLLWADAVRQNIRYPMDKAADTARFQ ETFVADAIVGYVREAGAAQKELGSYAGQRQQSMPVSGSEETLTLTLPSAQGFTAIGRMAAPGKRLSIRIEDAGQASLAVGLNTQRIGSTRLWNTRQYDRP RFLKSPDIKLQANQSVALVSPYGGLLQLVYSGATPGQTVTVKVTGAASQPFLDIQPGEDSSQAIADFIQALDADKADWLEIRSGSVEVHAKVEKVRGSID KDYGGDVQRFIRELNEVFIDDAYTLAGFAIPNQAKTPAIQQECAVRGWDCDSETLHKLPGTQHINVDQYAQCGGGCSGNPYDQTWGLNPRGWGESHELGH NLQVNRLKVYGGRSGEISNQIFPLHKDWRVLREFGQNLDDTRVNYRNAYNLIVAGRAEADPLAGVYKRLWEDPGTYALNGERMAFYTQWVHYWADLKNDP LQGWDIWTLLYLHQRQVDKSDWDANKAALGYGTYAQRPGNSGDASSTDGNDNLLLGLSWLTQRDQRPTFALWGIRTSAAAQAQVAAYGFAEQPAFFYANN RTNEYSTVKLLDMSQGSPAWPFP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|