Pseudomonas aeruginosa AZPAE15026, NT42_RS19165

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE15026 AZPAE15026_contig_21, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATATGCGGCGTTTTTTTTGCCTTCCTGACCGTTCGGAGAATTCTTGCAGAATATGTAAAAGACTTTCGTTGGATATCGGGTTTTTCCGATAGTGGCAAA AAAATATAATCGCGCCAGCTCAATGGATAATTGTCGCTGGCTGTCGACGATATTCGTTCTGTCTTCATCGATCTCGCCATGCAAGAGCGGGACGTGGAAA GCCTAAAGCCCGATGAGTCGAAGAGACTTTCAATAGAAGAGTCCGACTGCGTTCCAACCGGTTTCCAGTGTCTGGAAATACACTGGCAAGACTTCCCGAC GCCGAACTTTGATTGCTCCTATTCGACGTCTTCTCAAGGCCGCTGATACCAGCGGCCTTTTTTTTCGGGTTGCGCCCGGCTGGGCGCCCCATGGGAGCGA TCGCCCGCGCGAGGCCAGCAGAAGCGTCGCCGGGAACGACACCACAACACGCTTTCCGGCCTTGCCGGATTTCACCACGCTGTAAGAAGGAGCAACCGCA
DNA Sequence for Gene
>NT42_RS19165
ATGAGGAATCTGTTCGCCTTGACGCCGATGGCGCTGGCGCTGTGCACCGCGTCCGCCGCCTGGGCCGATGAGGGGGAAGCCAAAGAAGGCTTCATCGAAG GCTCCAGCCTCCAATTGCTGACCCGCAACTACTACTTCAACCACGACCGCCGGCACGCTTCCGGGCACGACAGCAAGGAATGGGCGCAAGGCTTCATCGC CACCTTTCAGTCCGGCTACACGCCCGGCGTGGTCGGCTTCGGCGTCGACGCCTACGGCATGCTCGGGCTGAAGCTCGACGGCGGCGGCGGTACCGGCGGC ACCAGCATCCTGCCGATCACCGCGCCGAGCAAGGAAGGCTACGAATCCGGCAAGGCACCCGATGAGTTCTCCAGTGGCGGGGCGGCGCTGAAGATCCGCG CCTTCGACACCGAGCTGAAGCTGGGCGACCAGTTCCTCAGCAACCCGGTGGTCGCCGGCGGCGAGTCGCGCATGCTGCCGCAGACCTTCCGCGGTGTGAG CCTGACCAACAACAGTTTCGAGGACCTGACCCTCACGGCTGGCCAGGTCAGTTTCACCAAGTACTACAACCAGAGTGGCCACCGTCGCCTCGGCTCGTAC TACGGCGAACTGCCGGGCGACCGCGACAGCCATCATCTCAGCTGGCTGGGCGGCACCTGGGGCGGCATCGAGGGCTTCACCAGCAGCCTGTACGCCGCCG AACTGCAGAACGTCTGGAAGCAGTACTACGCCGACGTCGACTACACCTACGAGGTCGACGACAACTGGTCGCTGAACCCCGGCGCGCACTACTACAAGAC CGTCGACAGCGGCGACTCGCTGCTCGGCCGGATCGACAACAACACCTACAGCCTGCATTTCGCGGTCGGCTACAAGCAGCACACCGTCACCGCGGTGCTG CAGAAGGTCAACGGCAACACGCCGTTCGACTACATCAACCAGGGCGACAGCATCTTCCTCGACAACTCGCAGCAGTATTCCGACTTCAACGGTCCCAACG AGAAGTCCTGGAAGCTGCAATACGACTACGACTTCGTCGCCCTCGGCCTGCCCGGCCTGAGCGCCTCTGCCTCGTACTCGCGCGGCAAGCTGGACCTGAC CCGGGTCGATCCGGACAGCCCCGGCTACGGCGGCTGGTACAGCGCCGACGGCAAGAACGCCAAGCACTGGGAACGCGACCTCGACCTGCAGTACGTGGTC CAGGGCGGTCCGGCCAAGGACCTCTCGCTGCGCCTGCGCTGGGCCACCCACCGCGGCACCGGCGGCTACAGCGCGGTGGACAACGACATCGACGAATACC GGGTGATCGTCGACTACCCCATCGACGTGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCCCGCGCGCTGGGCCCTTCGCCGGGCTCAGCGCTGGCGGAACAGTTCGCCGGGAGTGAAGCCGAAGAGTCCCTTGAAGGCGGCGATGTAGGCCGAGGT CGAGTCGTAGCCGCTGTCCAGGGCGGCGCCGGTGACGCTGTCGCCGGCCTCCAGCGCGTTGAGCGAGGCGAGCAGGCGCTGGCGTTGGCGCCAGAGCCGG TAGTTCATCCCGGTCTCGCGCTGGAACAGGCGCGACAGGGTCTTTTCCGAGGTGCCCAGGCGCTGCGCCCAGTCGCCCATGGTCAGGCTCTGGGTCGGTT CGTCGATCAGTGCCTGGCACAGCCGCAGCAGGCGCGGCTCGCGCGGCATCGGCAGGGAGAAGGCGACCTCCGGCAGCAGCCGCAACTGGTCCAGCAGCAC CTGCACCAGCCGCGACTCGGCGCTGTCGCCCTCCGGGTAGTCCACCGGCAGTTCGCAGAAACTCTTGATCAGCTCGCGCGCCAGCGGCGTCACCTCCAGC
Amino Acid Sequence
>porin
MRNLFALTPMALALCTASAAWADEGEAKEGFIEGSSLQLLTRNYYFNHDRRHASGHDSKEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLKLDGGGGTGG TSILPITAPSKEGYESGKAPDEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKYYNQSGHRRLGSY YGELPGDRDSHHLSWLGGTWGGIEGFTSSLYAAELQNVWKQYYADVDYTYEVDDNWSLNPGAHYYKTVDSGDSLLGRIDNNTYSLHFAVGYKQHTVTAVL QKVNGNTPFDYINQGDSIFLDNSQQYSDFNGPNEKSWKLQYDYDFVALGLPGLSASASYSRGKLDLTRVDPDSPGYGGWYSADGKNAKHWERDLDLQYVV QGGPAKDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDYPIDVF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site