Strain | Pseudomonas aeruginosa strain AZPAE14945 AZPAE14945_contig_7, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GACGCCGAGAGGTCGCCCCCTTGGCCGTGGTGCTGTGCCTTTGCCCGTGCGCCGCGCACAGACGTCTGTGCCTCGGATCGCCCGGCCGAGAGCGGTCGCA CGCGTGGCGATGGGCCGACAGTGAACCCGGGGACCAGGTGTGACTGGGTATTCAGTTCGCATAAAATGTGATCTAGATCACATTTAAACGTTTGCTTACC CTCTAGGACGGGTATCGTACTAGGTGCATCAAACGCTGCGGTCTATTGTTAAGTGGGACTGAAATGTGCCTTTCCGGCACAACGCCAACTCTATAGAGTG GGCTGACTGGACATCTTCAGGGGTCGTCGGGCACGGGCGCATGCGCCTCGGCAGGAAGCCGGGATTCTCGGACTGCCGTACAACGTGCCGGATATCGGGT GCCGAATCCATATTTGGCTGATTGGTTAATAGTTTAAGAAGAACGTAGCGCTATGGCCTTGGTTGACGGTTTTCTTGAGCTGGAACGCTCAAGTGGAAAA
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DNA Sequence for Gene |
>NS61_RS07825
TTGGAGTGGAGCGCCATCCTGCAGAAGATGGCGAGCGACCTTGGATTCTCGAAGATCCTGTTCGGCCTGTTGCCTAAGGACAGCCAGGACTACGAGAACG CCTTCATCGTCGGCAACTACCCGGCCGCCTGGCGCGAGCATTACGACCGGGCTGGCTACGCGCGGGTCGACCCGACGGTCAGTCACTGTACCCAGAGCGT ACTGCCGATTTTCTGGGAACCGTCCATCTACCAGACGCGAAAGCAGCACGAGTTCTTCGAGGAAGCCTCGGCCGCCGGCCTGGTGTATGGGCTGACCATG CCGCTGCATGGTGCTCGCGGCGAACTCGGCGCGCTGAGCCTCAGCGTGGAAGCGGAAAACCGGGCCGAGGCCAACCGTTTCATGGAGTCGGTCCTGCCGA CCCTGTGGATGCTCAAGGACTACGCACTGCAGAGCGGTGCCGGACTGGCCTTCGAACATCCGGTCAGCAAACCGGTGGTTCTGACCAGCCGGGAGAAGGA AGTGTTGCAGTGGTGCGCCATCGGCAAGACCAGTTGGGAGATATCGGTTATCTGCAACTGCTCGGAAGCCAATGTGAACTTCCATATGGGAAATATTCGG CGGAAGTTCGGTGTGACCTCCCGCCGCGTAGCGGCCATTATGGCCGTTAATTTGGGTCTTATTACTCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCTTGCCTCTCAGGTCGGCGAGCTGGCGATCGGTAATTTGCCCTTCTATATAGAAATGCAAAAGCAGATATATAGGGAAGGGCAGGTTCTCGCCATTCTC GAAACGACTGCCGCAGGATTGGCTTATCCCGAAGCGGCTCCAGAAAGTTTCCTGGCTTTCCCGTCGGGCGGTGCGGGTGGCCTTTGCCCGGAAGGCCATG TTTTGGGGCTGTGTTCTCTCGTGTGAAGCCATTGCTCTGATCTTTTCGGACGTTTCTTCGAGCCTAGCAAGGGTCCGGGTTCACCGAAATCTATCTCATT TGCTAGTTATAAAATTATGAAATTTGCATAAATTCTTCAGCTTCCTATTTGGAGGAAGTGAAGATGATCGTACAAATTGGTCGGCGCGAAGAGTTCGATA AAAAACTGCTGGGCGAGATGCACAAGTTGCGTGCTCAAGTGTTCAAGGAGCGCAAAGGCTGGGACGTTAGTGTCATCGACGAGATGGAAATCGATGGTTA
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Amino Acid Sequence |
>LuxR family transcriptional regulator
MEWSAILQKMASDLGFSKILFGLLPKDSQDYENAFIVGNYPAAWREHYDRAGYARVDPTVSHCTQSVLPIFWEPSIYQTRKQHEFFEEASAAGLVYGLTM PLHGARGELGALSLSVEAENRAEANRFMESVLPTLWMLKDYALQSGAGLAFEHPVSKPVVLTSREKEVLQWCAIGKTSWEISVICNCSEANVNFHMGNIR RKFGVTSRRVAAIMAVNLGLITL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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