Pseudomonas aeruginosa AZPAE14945, NS61_RS31690
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14945 AZPAE14945_contig_66, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCCCATGAGAATCGCCAGCGAATTTTTGGCTTCCCCCAATAACGCCTTGATGGAAAAGAGTTTCAAGACTAGTGGCACGGTTCTTGTCTAGCACCGATGC CCCCGGCATATCGCCTGGGCACTTTCAACGACAAGGAACGTATCC
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| DNA Sequence for Gene |
>NS61_RS31690
ATGGCAACCCCCGCCTACATGTCCATCACCGGCACCAAGCAGGGCCTGATCACCGCCGGCGCCTTCACCGAGGATTCGGTCGGCAACACCTACCAGGAAG GCCACGAGGACCAGGTGATGGTCCAGGGCTTCAACCACGAAGTGATCATCCCGCGCGACCCGCAGTCCGGCCAGCCGACCGGCCAGCGCGTGCACAAGCC GGTGGTCATCACCAAGGTCTTCGACAAGGCCTCGCCCCTGCTGCTGGCCGCCCTGACCTCCGGCGAGCGCCTGACCAAGGTCGAGATCCAGTGGTACCGC ACCTCCGCCGCCGGCACCCAGGAGCACTACTACACCACCGTCCTGGAAGACGCGATCATCGTCGACATCAAGGACTACATGCA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
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| Amino Acid Sequence |
>secreted protein Hcp
MATPAYMSITGTKQGLITAGAFTEDSVGNTYQEGHEDQVMVQGFNHEVIIPRDPQSGQPTGQRVHKPVVITKVFDKASPLLLAALTSGERLTKVEIQWYR TSAAGTQEHYYTTVLEDAIIVDIKDYM
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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