Strain | Pseudomonas aeruginosa strain AZPAE14945 AZPAE14945_contig_36, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GATCGCCGGCCTGAAGGGCCGCACCTACGGGCACGTCGCGGTGGTCATCAGCGGTCCGCTGTATCGGCAGAAGTACCCGATGTGCTGGTGCGGCAGCATC GCCGGCGCGGTCGGCCAGAGCCAGGGCCTGAAGTCGGTCGGCCAGGTGTGGAATCGTACCGACCGCGACCGCCTCAACTACTACGTCTACTCCCTGGCCA GTTGCAGCCTGCCCAGGGCCAGTTGATTCAGGCCGTGCTGCGAATGAGCCAGACTCATTCGCAGCACGATTCCCCACGAGCATCCCGACTCCACTCGCCC GTCCCTTCGCCGCCTGCCTGCGCACTCCGACCTCCGCATTCCGCCCGTATACTGCGACAAAACGGCGCCAGGGATTTTTCCGGCCCGCGAATGAACATCC TTCAACTTGAATGAAATTCATGGTCCGACCACCCCCGGCCGGAAAGCCCCTGCCTTTGTTATGCTTTTCACCTTTCCGCCCACTGACGCCAGGTCCATCC
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DNA Sequence for Gene |
>NS61_RS26755
ATGTCCAGCCCGCTCACCGATCGCAGCGCCCGCCTGCAAGCCCTCCAGCACGCCCTCAGGGAACGTATCCTGATCCTTGATGGCGGCATGGGCACCATGA TCCAGAGCTACAAGCTGGAAGAGGCCGACTACCGCGGCGAGCGCTTCGCCGACTGGCCGAGCGACGTGAAAGGCAACAACGACCTCTTGCTGCTGAGCCG CCCGGACGTGATCCAGGCCATCGAGAAGGCCTACCTCGACGCCGGCGCCGACATCCTCGAGACCAACACCTTCAACGCCACCCAGGTGTCCCAGGCCGAC TACGGCATGCAGTCGCTGGCCTACGAACTCAACGTCGAAGGGGCGCGCCTGGCCCGCCAGGTGGCGGACGCGAAGACCGCCGAGACCCCGGACAAGCCGC GTTTCGTCGCCGGCGTGCTCGGCCCGACCAGCCGCACCTGCTCGATTTCCCCGGACGTGAACAACCCCGGCTACCGCAACGTCACCTTCGACGAACTGGT GGAGAACTACGTCGAGGCGACCCGCGGCCTGATCGAAGGCGGCGCCGACCTGATCCTGATCGAGACCATCTTCGACACCCTCAACGCCAAGGCGGCGATC TTCGCCGTCCAGGGCGTGTTCGAGGAACTCGGCGTGGAGCTGCCGATCATGATCTCCGGAACCATCACCGACGCCTCCGGCCGCACCCTGTCGGGCCAGA CCACCGAGGCCTTCTGGAACTCGGTGCGGCATGCCCGGCCGATCTCGGTAGGCCTGAACTGCGCCCTCGGCGCCAAGGAATTGCGGCCGTATATCGAGGA ACTGTCGACCAAGGCCGACACTCATGTCTCGGCCCACCCCAACGCCGGCCTGCCGAACGCCTTCGGCGAATACGACGAATCGCCGGCGGAAATGGCCGTG GTGGTCGAGGAATTCGCCGCCGCCGGCTTCCTCAATATCGTCGGCGGCTGCTGCGGCACCACCCCGGCGCACATCGAGGCGATCGCCAAGGCAGTGGCCA AGTACCCGCCGCGGGCCATCCCGGAGATTCCCCGGGCCTGTCGCCTGTCCGGCCTGGAGCCGTTCACCATCGACCGCAGCTCGCTGTTCGTCAACGTCGG CGAGCGCACCAACATCACCGGTTCGGCCAAGTTCGCCCGGCTGATCCGCGAGGAAAACTACGCGGAAGCTCTCGAGGTCGCCCAGCAGCAGGTGGAAGCC GGCGCCCAGGTGATCGACATCAACATGGACGAAGGCATGCTGGACTCGAAGGCGGCCATGGTCACCTTTCTCAACCTGATCGCCTCCGAGCCCGACATCT CGCGCGTGCCGATCATGATCGACTCCTCCAAGTGGGAAGTGATCGAGGCCGGCCTGAAGTGCATCCAGGGCAAGGGCATCGTCAACTCGATCTCGATGAA GGAAGGCGTCGAGGCCTTCAAGCACCATGCCCGCCTGTGCAAGCGCTACGGCGCCGCGGTGGTGGTGATGGCCTTCGACGAGGACGGCCAGGCCGACACC CAGGCGCGCAAGGAAGAAATCTGCAAGCGCTCCTACGACATCCTGGTCGACGAAGTCGGCTTCCCACCGGAAGACATCATCTTCGATGCGAACATCTTCG CCATCGCCACCGGCATCGAGGAACACAACAACTACGCGGTCGATTTCATCAACGCCTGCGCCTACATCCGCGACCACCTGCCCTACGCCCTGAGCTCGGG CGGGGTGTCCAACGTGTCCTTCTCGTTCCGCGGCAACAACCCGGTACGCGAGGCGATCCACTCCGTGTTCCTCTACTACGCGATCCGCAACGGCCTGACC ATGGGCATCGTCAACGCCGGCCAGCTGGAAATCTACGACGAGATTCCGAAAGCGCTGCGCGACCGGGTCGAGGACGTGGTGCTCAACCGCACGCCCGAGG CCACCGAGGCCCTGCTGGCGATCGCCGACGACTACAAGGGCGGCGGCGCGGTCAAGGAGGCCGAGGACGAGGAATGGCGCAGCTACAGTGTCGAGAAGCG CCTCGAGCATGCGCTGGTCAAGGGCATCACCACCTGGATCGTCGAGGACACCGAGGAATGCCGCCAGCAGTGTGCGCGTCCCATCGAGGTCATCGAAGGT CCGCTGATGTCCGGGATGAACGTGGTCGGCGACCTGTTCGGCGCCGGCAAGATGTTCCTCCCGCAGGTGGTCAAGTCCGCGCGAGTGATGAAGCAGGCGG TGGCCCACCTGATTCCCTTCATCGAGGCGGAGAAAGGCGACAAGCCGGAAGCCAAGGGCAAGATCCTGATGGCCACGGTGAAGGGCGACGTGCACGACAT CGGCAAGAACATCGTCGGCGTGGTGCTCGGCTGCAACGGCTATGACGTGGTCGACCTCGGCGTGATGGTGCCGGCGGAGAAGATCCTGCAGACCGCCATC GCCGAGAAATGCGACATCATCGGCCTGTCTGGCCTGATCACGCCGTCGCTGGACGAGATGGTCCACGTCGCCAAGGAAATGCAGCGGCAGAATTTCCAGT TGCCGCTGATGATCGGCGGCGCCACTACCTCGAAGGCGCATACCGCGGTGAAGATCGATCCGCAGTACAGCAACGACGCGGTGGTCTACGTCACCGACGC CTCGCGCGCGGTAGGCGTGGCCACCAGCCTGCTGTCCAAGGAGCTGAAGGCCGACTACGTGGCCCGCACCCGCGCCGACTACGCGGTGGTCCGCGAACGC ACGGCCAACCGCAGCGCCCGCACCGAGCGGCTGAGCTACGAACAGGCGATCGCCAACAAGCCGGCGTTCGACTGGGCCGGCTACCAGGCGCCGACGCCTT CCTTCACCGGCGTCAGGGTGCTCGACGAGATCGACCTCGCGGTGCTCGCCGAGTACATCGACTGGACGCCGTTCTTCATTTCCTGGGACCTGGCCGGCAA GTACCCGCGCATCCTCACCGACGAGGTGGTCGGCGAGGCCGCCACCTCGTTGTTCAACGACGCCCAGGCGATGCTGAAGAAGCTGATCGACGAGAAGCTG ATCAAGGCCCGCGCGGTGTTCGGCTTCTGGCCGGCCAACCAGGTCGAGCACGACGACCTGGAGGTCTACGGCGCCGATGGCGAGACCCTCGCCACCCTGC ACCACCTGCGGCAGCAGACGATCAAGCCGGACGGCAAGCCGAACCTGTCGCTGGCCGATTTCGTCGCGCCGAAGGAAAGCGGCGTGCGCGACTACATCGG CGGCTTCATCACCACCGCCGGGATCGGCGCCGAGGAAGTGGCCAAGGCGTACGAAGCCAAGGGCGACGACTACAACAGCATCATGGTCAAGGCGCTCGCC GACCGCCTCGCCGAAGCCTGCGCCGAGTGGCTGCACGAGCGGGTGCGCAAGGAGTACTGGGGCTACGCCCGCGACGAACACCTCGACAACGAGGCCTTGA TCAAGGAGCAATACGTCGGCATCCGCCCGGCACCGGGCTACCCGGCCTGCCCCGACCATACCGAGAAAGGCACTCTGTTCGAACTGCTCGATCCGCAGGG CCTGTCCGGCGTCAGCCTGACCGAGCACTACGCGATGTTCCCGGCCGCGGCGGTCAGCGGTTGGTATTTCGCCCACCCGCAGGCGCAGTACTTCGCGGTC GGCAAGATCGACAAGGACCAGGTGGAACGCTACAGCCAGCGCAAGGGCCAGGAAGCCAGCGTCAGCGAGCGCTGGCTGGCGCCGAACCTTGGCTACGATG ACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCAGGAAGGCGACGATGAAATTCCTCACTCCCGAGCAGATGGAAAAGCCGCGCAAGCGCCGCCTGCGCAAGAAACTGCGCCTGGGCGAGTTCCAGGAGTT CGGCTTCAGCTTCGAACTGACCTACGACCGCAACGCCCTCTCCCACGACGATGCGCTGGACCATCTGATCGACTTCGTCGAGGCCCAGGGCTGGGTGTTC GGCGGTGGCGGCTCGCCGGAACAGGCGGAGATCAGCGGCTACCTGTGCCTGGCGCGGGTCGGCAGCCTGGACGAGGCGGACCGGGAAAGCGCCCGCCTGT GGCTGGAAGCCCAACCCTGGTGCAAGACCTTCGAGGTCGGCCCGTTGAGCGACTGCTGGCACAACTTCTTCGAGTGAAACCGGCGCCGGCATGACCTGGC CTGGTGCCAGCAGGCGCGAAGCTGCGACCTACGCCCGGATCAGGCGCGGTTCATGCCCCGTGTGGGCGAGGAAAGCCAGCAGGTCTGCGTAGCGGATGCA
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Amino Acid Sequence |
>B12-dependent methionine synthase
MSSPLTDRSARLQALQHALRERILILDGGMGTMIQSYKLEEADYRGERFADWPSDVKGNNDLLLLSRPDVIQAIEKAYLDAGADILETNTFNATQVSQAD YGMQSLAYELNVEGARLARQVADAKTAETPDKPRFVAGVLGPTSRTCSISPDVNNPGYRNVTFDELVENYVEATRGLIEGGADLILIETIFDTLNAKAAI FAVQGVFEELGVELPIMISGTITDASGRTLSGQTTEAFWNSVRHARPISVGLNCALGAKELRPYIEELSTKADTHVSAHPNAGLPNAFGEYDESPAEMAV VVEEFAAAGFLNIVGGCCGTTPAHIEAIAKAVAKYPPRAIPEIPRACRLSGLEPFTIDRSSLFVNVGERTNITGSAKFARLIREENYAEALEVAQQQVEA GAQVIDINMDEGMLDSKAAMVTFLNLIASEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEAFKHHARLCKRYGAAVVVMAFDEDGQADT QARKEEICKRSYDILVDEVGFPPEDIIFDANIFAIATGIEEHNNYAVDFINACAYIRDHLPYALSSGGVSNVSFSFRGNNPVREAIHSVFLYYAIRNGLT MGIVNAGQLEIYDEIPKALRDRVEDVVLNRTPEATEALLAIADDYKGGGAVKEAEDEEWRSYSVEKRLEHALVKGITTWIVEDTEECRQQCARPIEVIEG PLMSGMNVVGDLFGAGKMFLPQVVKSARVMKQAVAHLIPFIEAEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDVVDLGVMVPAEKILQTAI AEKCDIIGLSGLITPSLDEMVHVAKEMQRQNFQLPLMIGGATTSKAHTAVKIDPQYSNDAVVYVTDASRAVGVATSLLSKELKADYVARTRADYAVVRER TANRSARTERLSYEQAIANKPAFDWAGYQAPTPSFTGVRVLDEIDLAVLAEYIDWTPFFISWDLAGKYPRILTDEVVGEAATSLFNDAQAMLKKLIDEKL IKARAVFGFWPANQVEHDDLEVYGADGETLATLHHLRQQTIKPDGKPNLSLADFVAPKESGVRDYIGGFITTAGIGAEEVAKAYEAKGDDYNSIMVKALA DRLAEACAEWLHERVRKEYWGYARDEHLDNEALIKEQYVGIRPAPGYPACPDHTEKGTLFELLDPQGLSGVSLTEHYAMFPAAAVSGWYFAHPQAQYFAV GKIDKDQVERYSQRKGQEASVSERWLAPNLGYDD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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