Strain | Pseudomonas aeruginosa strain AZPAE14945 AZPAE14945_contig_24, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCTCAGCCTGCAAAAGGTCGATGGCGACACCCCGTTCGACTTCATCGCGCAGAACGACCGGACCTTCCTCTACGAAAGCAACGCCATGCAGTACGCCGA CTTCAACGGCCCCGGCGAGCGCTCGTGGAAGATCCAGTACCAGGCCAGCCTGGCCTTCCTCGCCGCCCCGGACTGGCAGTTCGGCGCCGCCTACGGCCGT GGCCAGGCCGACCTGACCCGGGTCGACCCGGACAGCGCGGGCTACGGCTACCTCTACAACCCCAATGGCAAGAACGCCCAGCACTGGGAACGCGACCTGT CGCTGCGCTACGCCTTCCCCGCCGGCCCGGCCAAGGGCCTCAGCGTGACCCTGCGCTGGGCCACCCACCGCCCCGGCGAAGGCTACACCGCCCCCGGCAA CACCCGCGGCAACTCCAGCTCCGACGAATACCGGGTGGTGGTCGACTACCCGATCAGGTTGCTCTGAACCCACGGAACCAGAAAAAAGAGAAACTCCCTC
|
|
DNA Sequence for Gene |
>NS61_RS21725
ATGCGTGCAGCCCTGCTACCCACCTTCGGCGCCCTCTCCGCCGCACTCTGCCTGGAGGCCCGCGCCGACGCCGTCGCGCTGCCGCCGCTGGCGCTCGGCA ACGCCAGCTTCATGGACGGCGTCAGCCGTCCCGGCATGCTCTTCGAACTGCCCCTGCAATACGTTCGGGCGAACAACGCCAGCGACGCCGGCGGGCATTC GGTTCCCGGTCGGCAACGGGTTCGTGGCACCACGCTGTTGCCGCACTTCGCCTACCTCAGCCAGAACACCCTGCTCGGCGCCCACTACGGCGCCGAAGTG CTGCTGCCGCTGGTACGCCTGGACCTCGATATCGACGGCGGCCCGGACGGCCGGCGCACCCGCCAGGGCGACCTGATCGTCAGCCCGCTGATGCTGCAAT GGGGGCCCGCTACGCTGTTCGGCCGCCCCTACTGGCAGCGCCTGAACTTCGTCTTCTCCCTGCCCACCGGTGACTACGACAAGGACGCCGCGATCAACAC CGGCAGCAACACCTGGATCTTCAACCCGCACTACGCCTTCACCTGGGAACTGGGCGAGCGCCTGGAACTCAGCGGCCGCCTGCACTACGCCTGGATCAGC CGCAACGACGACCCCTCGCCGCGCCTGGGCGCAAACGACGTACAGCCGGGCCAGGCGCTGCACGCGAACTTCTCGATCTCCTACGCGCTGGACCCGCACT GGCGGATCGGCCTGGCCGGCTACCAGTTGAAACAGATCAGCGCCGACCGCATCGACGGCCACCGGCAGGCCGACTCGCGCGAGCAGGTCTTCGGCATAGG CCCGGGGGTGATGTACAGCCAGGGCAGGCAAACGCTGTTCGCCAACCTCTACGCCGAAAGCGGCGCGCGCAACCGCAGCGAAGGCAACCAACTGACCCTG CGCTACCTGCTGGCGTTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ATCGGCGGATAACGCCCTGGAAACGCCGACACCTCCCCAGCTCCGTAGGGCGAATAACCGCTCGCGGTTATCCGCCGCTTATCCGGGGTATCGGCGGATA CCGCCTGTGGCGGTATTCGCCCTACAGGCCCTGGAAACGCCGGACAGCTCCCCCGGACATTTCCGCAGGCTCTCTCAGAAGCCCGGGAATTGGATAAAAA CCCAGTAGGAGGATGATGGAGGGGCCGGCAAATCCATCCCGCAGGGACAGGACCGAACGGCACTGCCCTCTATTTTCTGAGGGCAAAAAAGACGCGGGCC GCAGGTGCGGGAACACCTACGACCCGCTAACCACAAACCAGCTTATAAAGGAGCTGACCCATGGCTAAGCCGAATGATACGTCCAACCCCGAGGTAACAG AATCGTCCCCCCGCTTCGTCCCGCTGCTACCCACCTCCCAGGCCGACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCA
|
|
Amino Acid Sequence |
>hypothetical protein
MRAALLPTFGALSAALCLEARADAVALPPLALGNASFMDGVSRPGMLFELPLQYVRANNASDAGGHSVPGRQRVRGTTLLPHFAYLSQNTLLGAHYGAEV LLPLVRLDLDIDGGPDGRRTRQGDLIVSPLMLQWGPATLFGRPYWQRLNFVFSLPTGDYDKDAAINTGSNTWIFNPHYAFTWELGERLELSGRLHYAWIS RNDDPSPRLGANDVQPGQALHANFSISYALDPHWRIGLAGYQLKQISADRIDGHRQADSREQVFGIGPGVMYSQGRQTLFANLYAESGARNRSEGNQLTL RYLLAF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|