Strain | Pseudomonas aeruginosa strain AZPAE14945 AZPAE14945_contig_16, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAGTGGCGAACTCAGTCCGTTCCGCCTGCGCCTGGCCGAGCGCGGACCCGAGGGGCGGGCGTTGTCGCTGAGCAGCGACGGTTTCCGCCTGCCACGGGTC GAGGTGGCGCGGCGATGAAGCGCGCGCGTGGTTTCACCCTGCTGGAAGTGCTGGTGGCCCTGGCGATCTTCGCCATGGTCGCGGCCAGCGTGCTCAGTGC CAGCGCGCGCAGCCTGCAGAACGCCTCGCGGCTGGAAGACAAGACCCTGGCGATGTGGATCGCCGACAACCGTCTCAACGAATTGCAACTGGAACAGACG CCGCCCTCCAGCGGCCGCAACCAGGGCGAGCTGGAGTTCGCCGGGCGCCGCTGGGAGTGGCGCACCCAGGTCGACAGCACCGCCGAGCAGGATATGCGGC GGGTGATCGTCTGGGTCGCGGCGAAGCCCCTTGGCCGCGAGCGTGGCAGCATCGAGGAACGCGCCGCGGCGCGCCTCGTCGGTTTCCTCGGGAGCCAGCC
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DNA Sequence for Gene |
>NS61_RS16860
ATGAGGCTACAGCGGGGCTTCACCCTGCTCGAGCTGCTGATCGCCATCGCCATCTTCGCCCTGCTGGCCCTGGCCACCTACCGCATGTTCGACAGCGTGA TGCAGACCGACCAGGCGACTCGCGTGCAGGAGCAGCGCATGCGCGAGCTGGTGCGGGCGATGGGCGCGCTGGAGCGCGACCTGACCCAGGCGGTCGAACG TCCGGTACGCGACGAACTGGGCGATAACCGTGGCGCCTTCCTCAGCGAGGGCGAGAACGACCAGATCGTCGAATTCACCCGTGGCGGCTGGCGCAACCCG CTCGGTCAGGCGCGCTCGCGCCTGCAGCGGGTGCGCTGGTCGCTGTCCGGGGAGACCCTCGAACGCCGCTACTGGCTGGTTCTGGACCGCGCCCAGGACA GCAAGCCACGGGTGCAGCAGGTGCTGGACGGGGTTACCGCGCTGAGCTGGCGCTTCCTCGACAAGGAGCACAACTGGCAGGGCCACTGGCCGACCGACGA AGGCAGCGAGGAGGAGCGCCTGGAAAGCCTGCCGCTGGCGGTGGAGATGACCCTGGAGCACCGCCACTACGGCAAGCTGGTGCGCGTCTGGCGTTTGCTC GATCCGCCGCTCAAGCAGGACCAGCCGCAGGGCCAGCCGGGCGGCGAGAATGGCGAGAACGGCGAGGGCGGAGTGCCGCAGCCGCCGGAAGGCATGCCGG GGGCGCCGGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCGCGGGCAGAACGGCGTCGCGCTGATCACCGTGCTGCTGGTGGTGGCGGTGGTGACTATCGTCTGCGCCGGGCTGATCATCCGCCAGCAGTTGGCGAT ACGCAGCAGCGCCAACCAGTTGCACGTGCGCCAGGCCTGGCACTATGCGCTGGGCGGCGAACGCCTGGCGGAAGCGGTGCTGCGCCGCGACCTGCGCCAG GGCGGCGAGAATACCCGCGAGCCGGTGGACCACCTGGGCGAGGCCTGGGCTCGACCGATGACGCCCTTCAAGCTGGACGACGGCGGCGAGCTGCGGGTGC GGATCGAGGACCCCAGCGGGCGTTTCAATCTCAACGGACTGGTGCGCAAGCGCAAGGTCAAGCCGGATTCGGTGAAGCAGTTCCGTCGCCTGCTGGCCAC CCTGGGGATGAAGGAAGAGATCGTCCAGGGCTTGCCGGACCGGCTGGCCGACTGGCTCGACGCCGACCAGAATCCGCAGGGCGAGCAAGGCGCCGAGGAC
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Amino Acid Sequence |
>general secretion pathway protein J
MRLQRGFTLLELLIAIAIFALLALATYRMFDSVMQTDQATRVQEQRMRELVRAMGALERDLTQAVERPVRDELGDNRGAFLSEGENDQIVEFTRGGWRNP LGQARSRLQRVRWSLSGETLERRYWLVLDRAQDSKPRVQQVLDGVTALSWRFLDKEHNWQGHWPTDEGSEEERLESLPLAVEMTLEHRHYGKLVRVWRLL DPPLKQDQPQGQPGGENGENGEGGVPQPPEGMPGAPE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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