Pseudomonas aeruginosa AZPAE15032, NT48_RS25090

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE15032 AZPAE15032_contig_28, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAAGCGCTCGACTTCCTCGACCTGCGGCGTGGCTACGAGCCGCTGCTGGACTGGCTGGAGCGGGCCATCGAGTCGATCCGCGCGGGCTACCGCTGCCTGC CGTTCGAGCAGGAGGAGCAGGTATTTTCCGTGCGCCTGCCCGATCCGGCGCCGCGTCAGCGCCTGGTGGTCGGCCTGCGGATGCCCGCCGGCGCCGGCGA ACAGGCGGCGGCTGACTGGCTGGAGCGCGCCATCGTCGCCTCCGACCCGCACCTGCCGTTGCTCGCCCGGCAACGCATGAGCGGGCTGGCGCGGCAACCG ATGAATCGCCAGGAACAGGTGGCCTACAGCGTCGGCGACGACACCCGTTTGTTCGTCGTGCAGGGCGCCGGCGACTGGTTCGATGCCGGCCAGCCGCTGC GCATCGTCGCGCCGGTCAGCGGGGTCGCCAGCAGTCCCTGGCAGATCGTGCTGTTCGTCGCCGACGGCAGCGACAACACCTAGACAGGAAGGAGCCGCCA
DNA Sequence for Gene
>NT48_RS25090
ATGCCCGAAGGGAGTGCAGGGCCTTTTTCCCAGGCGTACCAGGCGCAGCCGCTCAGCACGGCGTTCCGCCAGGCCTGGCAGGAATGGCTGGAGGCCTGGG GCGCCCTCGACCGGGACGCACAGGATGTGCCGCGGATGGTCGAGCGCGCCCTCGAACTGTCCACCCGTATCACCCGGCGTCTGTGGCGCAGCGCCTTCGC CAGCGTCGGCGACGCGGCGGGCGTGCAGGTCAAGGCGATGGTCTATGCCTTCGTCGCCCTGGTCGACGAGACCCTGGTCTTCAGCGCCTGGCCGGGGCAG GGCGCCTGGCAGGAAAAACCGCTGGAGTCGCATCTCTACGGCAGTCGCCAGGCGGGCGAATACCTGCCGCTGGCGATCAAGCGCCTGCTCGACGAACGCG CCCCGGCCAGTCGCGACCTGGCCAACGTCTACCTGCAATGCCTGATCCTCGGCTTCCGCGGTCGCTTGCGCGGGCCGCGCGGCGAGGCGCTGCATGAGAA GTGGCGGCAGGCGCTGTTCGCCTTCGCCTGGCAGCGCGAGGCGGACGCCGCCGACCTCGGCCGTCGTCTCGAGCAGCCCGCCGCTGCGCCGCCACGGCGT CTGCCGGTGCGCGCGGCGCTGCCGGACGGCTTCCGCCTGGGCCTGGCGGTGCTCGGGCTGGTGCTGCTGATGAGCGGTATCGGACACCTGTTCTGGCGCG ACATCCAGCACGAAATGGCGGCGGTGACCCACCTGGCCGATCCGGAGCAGGCGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGCGCGACACTGTTCATGCTGGTTCTCCTCCTGGTGCTGCTGGCGCTGCTGCTGGGGGCGCTGGGCTGGTGGTGGCGAACCCGCGGTGGTACGGAGAT CCGCAGCTTCTACGCAGCGGTCCGGCAGATGGAGCGCGAGCAGGGCTGGCAGGGCCGCTACGAAGCGCCGTGGCTGCTGATGCTCGGCAACGAGACCGAG GGCGAGCAGTTGTGCTCCACCTGGCGTCTGCTGCCGGTGGCGCGCCCGGCCTGGTTCGGCCGCTGGTGGTCGGACGGCGAGGGGGCGATCCTGCTGGTGC CCGAGTCGGTGTTCCTGCCCGACGAGGGCCTGCGCCGGCAAAGCGGCGCCTGGCTGCGCCTGTTGCGTCTGTTCCTGCGCCTGCGTGGCAGGCGCGCGCT GGACGGAGTGGTCTGGAACATTCCGCTGGCGCGGCTGCAGGATGGCGAGCAGGCGGCCAACCTCGGCCTCGCCGCGCGCCGTCGTTTCGTGGAACTGACC
Amino Acid Sequence
>type VI secretion system protein ImpK
MPEGSAGPFSQAYQAQPLSTAFRQAWQEWLEAWGALDRDAQDVPRMVERALELSTRITRRLWRSAFASVGDAAGVQVKAMVYAFVALVDETLVFSAWPGQ GAWQEKPLESHLYGSRQAGEYLPLAIKRLLDERAPASRDLANVYLQCLILGFRGRLRGPRGEALHEKWRQALFAFAWQREADAADLGRRLEQPAAAPPRR LPVRAALPDGFRLGLAVLGLVLLMSGIGHLFWRDIQHEMAAVTHLADPEQAP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site