Strain | Pseudomonas aeruginosa strain AZPAE15032 AZPAE15032_contig_27, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AAGCTGTTGCTCGGCGGCCAGGACCTGGGGCGCATCACTACCGCGCAGATCCCTTTCCTGCGCCGGCAGATCGGCGTGGTGTTCCAGAACCACCAACTGC TCACCGATCGTACGGTGGCGGACAACATCGCCCTGCCGCTGCAGATCCTCGGCATGCCCAAGCCGGAGATCGCCAAGCGCGTGGCCTCGGCCCTGGAGCG GGTGAACCTGAAGGAAAAGGGCGAGGCGTTGCCTTCCGACCTTTCCACCGGCCAGCAGCAGCGGGTCGGCATTGCCCGCGCCATCGTCCACCAGCCGGCC CTGCTGCTGGCGGACGAACCCACCGGCAACCTCGACCCGCGACTCGCCTCGGAAATCATGGGCGTGTTCGAGGATATCAATCGCCTGGGCACCACCGTAC TGATCGCCAGCCACGACCTGGCCCTGATCGCCCGTATGCGCCATCGCATGCTGACCCTGCAGCGTGGCCGGATCATCGCTGACCGTGAGGATGAGGCCTG
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DNA Sequence for Gene |
>NT48_RS24855
ATGAGCGCCAACGATCTTCCCCGTGGCCCCGAAGAGGGCGCACCGGAACGCAAGACCCGCGAGAAACCGAGCCAGGAGCAGACCGACTGGAGCGGCTCGT TCAGCGCCTACCTGGAAAGCCATCGCGCCAGCCTGGTGGACAGCCTGCGCCGGTTGTTCGGCCACCCGTTCGGCAGCTTCTTCACCTGCCTGGTGATGGG TATCACCCTGAGCCTGCCGATGGGCCTCTCGCTGCTGCTGAACAATGTCGAACGGCTCGGCGGCTCCTGGCAGCGGGCGGCGCAGATATCCCTGTTCCTC GACCTGAAGACCAGCGAAAACCAGGGCCAGGACCTGCGCGAGCAGATCGAGCGCCTGCCGGACGTGATCGAGGCCCAATTGATCAGCCGCGAGCAGGCGC TCAGCGAATTGCAGGAACAGTCCGGCCTGGGCGAAGCGCTCAAGGAGCTGCCGGAGAACCCGCTGCCGCCGGTGATCTCGGTCACGCCCAAGCAGATCGA CCGGGCTGGCCTGGAGGCACTGCGCCAGCAGCTCGCGGAGCTGCCTCATGTGCAGCAGGCGCAGCTCGACCTGGTATGGGTCGAGCGCCTGAGCGCGATC CTCAAGCTCGGCGAACGCTTCGTCTTCGGCCTGACCATCCTGCTGGTGCTGACCCTCTTGCTGGTGGTGGGCAACACCATCCGCCTGCACATCGAAAATC GCCGTAACGAAATCGAGGTGATCAAGCTGGTCGGCGGGACGGACGGTTACGTGCGCCGGCCATTCCTGTACATGGGCGCGTTGTACGGCCTGGGCGCGGG CATCCTGTCCTGGGCGCTGCTGGCCTATTCGCTGAACTGGCTGAACGGTTCGGTGGTCAACCTTTCAGGGCTGTACGGCAGCGACTTCGGCTTGCAGGGC GTGCCGCTGGACGACGGCCTGTCGCTGACCGTGGGCGCGGTGCTGCTTGGCTGGGTCGGCGCCTGGCTGGCCGTGGCCCGCCACCTGCGCGAGCTGGCGC CGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGACAGGCGGATCACGACCGGCCAGCGGGTCGCTGTAAAGGAACTTATACACCCGCTTGCAGTCAGATATCCGAGTGCTACACTGCGCGAGTTTCGTGAA TCGGAGGATTCGCATGACCACTTCTTTGCAACCTGTACATGCCTTGGTTCCAGGCGCAAACCTGGAAGCCTACGTGCACTCGGTGAACAGCATTCCGCTG TTGTCGCCGGAACAGGAGCGTGAACTGGCCGAACGCCTCTTCTATCAGCAAGACCTGGAAGCGGCGCGGCAGATGGTGTTGGCGCACCTGCGCTTCGTTG TTCATATCGCCAAGAGTTATTCGGGGTACGGCCTGGCCCAGGCCGACCTGATCCAGGAAGGCAACGTCGGCCTGATGAAGGCCGTGAAGCGTTTCAACCC GGAAATGGGCGTTCGCCTGGTGTCCTTCGCCGTGCACTGGATCAAGGCGGAGATCCACGAGTTCATCCTGCGCAACTGGCGGATCGTCAAGGTCGCCACC
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Amino Acid Sequence |
>cell division protein FtsX
MSANDLPRGPEEGAPERKTREKPSQEQTDWSGSFSAYLESHRASLVDSLRRLFGHPFGSFFTCLVMGITLSLPMGLSLLLNNVERLGGSWQRAAQISLFL DLKTSENQGQDLREQIERLPDVIEAQLISREQALSELQEQSGLGEALKELPENPLPPVISVTPKQIDRAGLEALRQQLAELPHVQQAQLDLVWVERLSAI LKLGERFVFGLTILLVLTLLLVVGNTIRLHIENRRNEIEVIKLVGGTDGYVRRPFLYMGALYGLGAGILSWALLAYSLNWLNGSVVNLSGLYGSDFGLQG VPLDDGLSLTVGAVLLGWVGAWLAVARHLRELAPR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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