Strain | Pseudomonas aeruginosa strain AZPAE14955 AZPAE14955_contig_35, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TACGACATCCTCCAGGGTGGGCTTGCCCTCACCAGCGGCAACTACCAGCTCAACTACCAGGGCAACCTGCTGAGCATCCTGCCGCTGCCGGTCACGCCGG GCGACCTGGGGCAACTGGCAGCGCTCTCCGACTTGCGCGAACTGCAGAAGGGGCGCGATCCGGATACCCCCGGGGATGCGGTCTACCGCACCACCACGCT GGAAAACCCGTTCCTCGAAAACCCGTTCCTGCGCGCCTACGCTCTGGGCATGGACGTCAGCGATCCTAACCTGCTGCCGGCTACCGCCGCGGGTCCGGCG AAGGACGCCAGCGCCAAGCGGGTGGGGCAGTTCACCGATCGTCCGCTCAGGGCAGAGGCCGAGAGTGGGGCGGGTTGCTCGAACCAGAGCTACCTGGCCG ACTACTGGAGCTGCTTCAACAAGCCTCTGAATTTCTAACCCTTTTCGCAATGCGCACTATCGTCTCCGGGCGGTAGTGCGTCATCTGCCCGAGGTGAATG
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DNA Sequence for Gene |
>NS71_RS26770
ATGAAACCTTCGCAATGGACGCTTCGCTGGGTGACGCTCTGTGGCTGCGGGATGCTGGCTGCTTCCGCCGCCGCCGTGGAGTTGCCAGGGACTGTACAGC CATCCCAGCTCGATGAACGCTTCAAGCCCCGCAGCGAGCCGCAAGCCAAGCCCGAGGCGCCGCTGGTGGTGCCCAAGCAGGTCGCGCCGCAAGGCAGCGA ACAGATCCGCTTCGAACTGCGCGAGATACGCATCGAAGGCAACACCCGCTATGACAAGGCGGTGCTCGAGTCCTATTACCAGCATATGCTCGGCAAGCAG GTGTCCCTGGCCGAACTGGTCGACCTGGCCAACCGCCTCACCGCCAAGTACCGCCAGGACGGCTACCTGTTGACCCAGGTAGTGGTGCCGGAGCAGAGCA TCGAGGGCGGCAAGGTACGCCTGCAGGTGATCGAGGGTTACCTCGAACACGTGCAGATCAAGGGAACCGTCGATGGGCCGCGGGTGCGAGTGGAGGAACT GCTCGCGCCGCTGACCGAAAAACGTCCGCTGGATGCCGATACCCTGGAGCGCGGCCTGCTGCTGGTCGGCGACCTGCCGGGGGTCAACGTGCAGAGCGTG CTCAGCCCGGGTCAGGCGCTGGGCTCGTCGAACCTCGACGTGGCCTTGCAGCAGCAGCGATACGAAGGCTTCGTCAGCCTCGACAACCGCGGCTCGCACT ACACCGACCCGACCACCCTGGCCTTCGGCGCCACCGAGTTCTCCCGCCTGGGCTTCTACGAGCAGATCGACGTGCTCGGCGCGATCTCGCCGTTCAGCGA TGCCACCCGCTACATCCAGTTGCGCGGCACGTTGCCGCTGGGTGGCATGTTCGCCGGCGATACCCTGCAGATCATGGGTTCCTATTCGAAGGTCAACCCG GACATTCCGGACTCGGTATTCCCCTTCGACAGCGTCAGCAAGAGCACCGAAGGCAGCATTTCCTACAACCATCCCTTCATCCGCTCGCGCTCGCAGAACC TGAGCGGCGGCCTGGCGTTGCAGTGGAAGGATACCGAGACCCGCCTGCGCGACTTCGCCAGCGACGCCTCGAACCCCGGTCGTGACCATGTGCGGGTGTT CCAGCAACGCCTGACCTATGACTGGGTCGACCGCTGGATGGGCATCAACCTGGCGGAGGTGCGCAACAACATCGGCCTGGACATGTGGGGCGCGACCAAG AAGGACGATGAACGTCGTTCCCGCGAAGTGGCCGACGGACGTTTCGTCTATCTCAACGGCAACATCGGGCGTCTGCAAGGGCTCGGTGGACCCTGGTCGG TGTATGGCGAATTGCAATGGCAGTACAGCTTCGACCCGTTGCTGCCGAGCGAGCGCTTCGGCGTCGGCGGCAGCGGGATCGGTCGCGGCTTCGCCCCGGG CAACATCACCGGTGACCGTGGCTTCGCCCTGAAGCTCGAACCGCGCTATGGCCAGGCGGTGGGCTATAGCTGGCTGCGCAGCTACCAGGCCTACGCTTTC TACGACTGGGGCAAGACCTACAACCTCGACGTGGACGATGACGAGCAGCAGAAGCTCGGCTCGATCGGTGCCGGGGTGCGCTTCAACCTCACCGACCAGT TGTCGTTCAACCCGGAGATTGCCCGCCAGGTCATCGGCGAGCCAGCCGACCAGCGCGATGGGAAGCGCGAGACGCGGGTCCTGTTCAACGTGGTGGCGCG CTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACCCTGCCGGCCTCCGTTCCGGAGGCTGCTGACGGAGCCCCTCTCCGGTTCTGCGGAGAGGGAGGTCCGTGCTCAATTCCGAGTGTTTTTCTCAAACTTT CGATTTCTTCGATTTTTCATATCGATGCCGTCAATCCGTGCCAAGGCCGGTCGGAGAGGCGTATTCTTGCTGTAACTCCTGTGCTAGAGCGGTTCTTCGC ACTATTTCAAACGTCGATGAATACTATTGGCGCGCTTCGTTTTCCAATCGAGTTTCCCGAACAGAGAATGGCCCCACGTAACGAATACCTGGAGCCACTG CCATGAAACGCCCGCTGATCCTCGCCATCGCCCTTGCTACCCTGACCGCCAATGCCGCCTTCGCTGCACCGCGGGTCGAATCCATCGCCCTGCGCGGTGC CCAACAACTGATCGCCTCCGACGGTTCCGACCGTACCCTCGAACGCCTGCGCAAGACCCAGGCGCCGCGCGTCCAGGAAGAACGCCGGGTCGCCGAAAGC
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Amino Acid Sequence |
>hemolysin activation/secretion protein
MKPSQWTLRWVTLCGCGMLAASAAAVELPGTVQPSQLDERFKPRSEPQAKPEAPLVVPKQVAPQGSEQIRFELREIRIEGNTRYDKAVLESYYQHMLGKQ VSLAELVDLANRLTAKYRQDGYLLTQVVVPEQSIEGGKVRLQVIEGYLEHVQIKGTVDGPRVRVEELLAPLTEKRPLDADTLERGLLLVGDLPGVNVQSV LSPGQALGSSNLDVALQQQRYEGFVSLDNRGSHYTDPTTLAFGATEFSRLGFYEQIDVLGAISPFSDATRYIQLRGTLPLGGMFAGDTLQIMGSYSKVNP DIPDSVFPFDSVSKSTEGSISYNHPFIRSRSQNLSGGLALQWKDTETRLRDFASDASNPGRDHVRVFQQRLTYDWVDRWMGINLAEVRNNIGLDMWGATK KDDERRSREVADGRFVYLNGNIGRLQGLGGPWSVYGELQWQYSFDPLLPSERFGVGGSGIGRGFAPGNITGDRGFALKLEPRYGQAVGYSWLRSYQAYAF YDWGKTYNLDVDDDEQQKLGSIGAGVRFNLTDQLSFNPEIARQVIGEPADQRDGKRETRVLFNVVARF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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