Pseudomonas aeruginosa AZPAE14955, NS71_RS26145

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14955 AZPAE14955_contig_34, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTATGCACCAATCGCTATCTGGCCGAGCGCCTGGGTGCCGGCACCGCGCTGGGCTTCGAACGGCCCGGGCCGGTCGCCGCCGCACGCCTGCGCAACGCGC CCAGCGCGCAGAGCCAGCCGCGCCTGGACGGCCAATCGCGCTGGAGACTGGTCTCGCAGCTGACCCTCAACCACCTCTCGCTGGTGGAAGGCCCGCGCGC CCTCGAAGCCCTGCGGGAAATCCTCGCCCTGCACAACCTGCGCGACGACGCCAGCGCCCGCCGGCAGATAGAAGGGCTGAGGCAACTCGACTGCCAGCGG GTGGTGGCGCACGTCGGCGAGGATGCCTGGCGCGGCTGGCGCAATGGCCTGGAAATCCGCCTGCGACTCGATCCGCAACACTTCGTCGGCGCCAGCGGCG TGCTGTTCTCCGCCGTGCTGGCGCAGTTCTTCTCGCTGTATGCCACCGCCAACCGCTTCGTGCGCACGGTCCTGGTGGAAGCCGACAAGGAGGTGAAGAC
DNA Sequence for Gene
>NS71_RS26145
ATGGCAACCCCAGGCCGGCTCGCCGCTCTCCCTCTGAGTCAGCGGCTGCGCCGCACGCCGCAGCGCTTCGAACTGTTGCAGGCGCTGCTGCTGCTCGAAC GCGAGCGTCCCCAGGCGTTGCCGCTGGGCACCGGCAACGCGCCGCGGGCGGAGGCCCTGCGCCTGCGCGGGCCGCTGTTGCCACTGTTCGCCTCGAGCGA GGTGGAAAGCCTGCTCGACGACCCGCAGCAACCGGTGCTGTCCACCCCGGTGTTCGGTCTCGGCGGACCCGACGGCCCGTTGCCCTATGCCTACCAGGAA TGGCTGCAACAACGCGCCCGGCAGAAGGACCATGCCCCCGCCGAGTTCCTCGACCTGTTCCAGCACCGCCTGCTCAGCCTGCTCTACCGGGTGCTGCGCA AGCATCGCGTGGCGCTCGGTTTCGCGGTGCCGGCGGCGACCCCGGTGCAGGCGCAGCTACGCGCCCTCAGCGGCCTGTTGCCGAAAGCCCTGCAAGAGCG CCTGGCGCTGCCGGACAGCGCGGTACTGGCACGCACCGCGCTGTTCGCCGGCGGGCGTCGCTCCCTGGCCGGCTTCGCCGGCCTGGTGCGCCAGCATTTC GGCGTGGAGGCACGGCTGGACGCCTACCAGGGCGCCTGGAAGGAAATCCCCGCGGCCAGCCGCAGCCGGCTGCAACGCGGCGGACGCAACCTGCGCCTGG GTCGCGACGCCATAGCCGGCACGCGCACCTGGGACGAGCACGCCGGCATCGCCCTCAGTCTCGGTCCGCTGGATGCCCGCGAAGCCGCCCGCTTCTTCCC CGACGGCGACGCCCATGGCCAGTTGGCCAGCCTCGCCGCGCTGTACTTCGGCCCCGACCTGGATTGTCGCCTGAGCCTGCTGGTGAGCGGCGGCGCGCCG CTGCGCCTGGAGCGCGGTGCACCGCCCAGGCTGAGCTGGAACACCGGCCTGCGGCGCGTCGAAGACAGCCAGCGGCAGCGCATCGATCTCGACCTGCGGC AGCCGGAGGTAGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AATGGAACTCGCCGCCCTGATCGGCCGCCTCAACCCGGACTGTCGCCGCGCCCTGGAGCGCGCCGCGCAACGCTGCCTGCAACGCACCCATCATTACGTA GAGATCGAGCACCTGCTGCTGGAACTGCTGGACATCGACGGCGGCGACTTCGCCTGCCTGCTGCCGCGCTTCGGCCTGGAGCGCGACGCCCTGGTCGCCG AGATCAACCTGTCGCTGGAGCTGTTCAAGGCCGGCAATACCCGCACTCCGGCGCTGTCCGCGCACACCATCGGCCTGCTCGAAGACGCCGTGGTCCACGC CAGCGTGCTCGGCCAGGCGCAGATTCGTTCCGGCCTGCTGCTGCTCGCCCTGCTCGACCGCGAGGAGCGCCGCGCCCTGTTGCTGAACAGCGCGTCGTCG CTGCTGCGGATTCCCCACGAGGCCTTGCAGGCCAACCTGCTGGAGTGGATCCAGGCCTCCCGCGAACAGCCGCCCGCGCCGAACCGCCCGGCGGTAGGCG
Amino Acid Sequence
>type VI secretion protein
MATPGRLAALPLSQRLRRTPQRFELLQALLLLERERPQALPLGTGNAPRAEALRLRGPLLPLFASSEVESLLDDPQQPVLSTPVFGLGGPDGPLPYAYQE WLQQRARQKDHAPAEFLDLFQHRLLSLLYRVLRKHRVALGFAVPAATPVQAQLRALSGLLPKALQERLALPDSAVLARTALFAGGRRSLAGFAGLVRQHF GVEARLDAYQGAWKEIPAASRSRLQRGGRNLRLGRDAIAGTRTWDEHAGIALSLGPLDAREAARFFPDGDAHGQLASLAALYFGPDLDCRLSLLVSGGAP LRLERGAPPRLSWNTGLRRVEDSQRQRIDLDLRQPEVA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site