Pseudomonas aeruginosa AZPAE14955, NS71_RS02235

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14955 AZPAE14955_contig_3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCAGGAGATCGAACCCAACGTGGTGGCCGATCCGCCGAAGAAGCCGGACAGCAAGTACGGCAGCCGCCCCATCTGATTTCGCGCCATCCCAAGGCCCGC CTCCCGCAAGGGATGGCGGGCCTTGTGCTATGGCGCCGGTCACTTTGACGGGCATCTCGCCCCGCCGCATCCCGGTTGGCGAGCCGATCTTTCGCCTGTT CAGGCACGGCTGGCGACGGGCCAAGGCCTTTTCCTTTCCGGTGGCAGCGCTACCGTTCCACATCGTCAACCGAAGCTGCTTGCCATCCAGGCGCTCCAAG CGGCGTCCGGGGTTGCCGGAGAGCGAGCTGTAGAGCTTGCTTAAGAATTTTCCTAGCGATTCTTAGGCGGATTCGCGGAGCCGTGTAGGTCCTGTCTTAT GGCTCCTTTCCAGGTGTTCTGAAAAGATTAGCCACCCATCAAGTTCACTCCGGTTCCGGCGGATTTTCCCGGACATGCCGGACACATCGGTTGTCATCCC
DNA Sequence for Gene
>NS71_RS02235
ATGGAGTTCAAGACGTTCCGTCGAACCCTGCTGCTCGCGGCAGTCCTGTTCGTTCCCGCCGGCACCAGCATGGCTGCCAATCTGTACGCTTTCGGCGGCC GCGATATCGCCGTGCCCTCGATCCTTCCCGAGGGAAGTGTCATGTCGCGCTACACGTTCACTCCCATGCAACTGTGCGGCAAGCCCAGCTGCGATCTCAT CGGCGTCTCTCTGTACAACAAGGGAAGTGTCTGGGACCCGGTCGATGGTCCGGACCTGAATACCAACGTGCCGGGCCTCTCGGTGCGCCTGCTGCTGGAT GGCATACCGGCGAGCAGCCGTTTCAAGGGCACTTTCTCGCAAATCGCGGAGATCCAGTTGTTCCGCAACTCGACGCCGCTCTCCGACGGCCAGTTCGCGA GCGGAGCCTTCAACTCGTACTTCCTCATTACCTACAAGGACGGGCTTATCGCGTCTGGCACCTCCTCCATCAGGTTGACCGGGAGCGTCACCACGATCAA TGCGACCTGCCAGGTCGCCGACCAGACCGTGAAGCTGCAGTCGATCGCTGCCGCCCGGCTGAACGGCGTCGGCACCTACGCGGCCGTTACCCCGTTCAAT CTGGTAGTGGCCGGCTGTCCTCGCGGGTACAACCGCGTCGGCTACAGCCTTCAAGCGGTGGGGGGCGCGGTGGCCGAAGGCTCGGGTGTATTGCCGCGCC TGGCGGGCAGCACCGCGACCGGCGTATCGATCCGGGTCACCGACGAGGCCGGCGTTCCGCTACGGATGGGACTCTCGTTGCCGGTGACCGCGTACGACAA GAACACCGGCGGGGCTTACTGGATCCCGATGAAAGCGTCCTATGTGCAGACCGCCGAGAAAATCACGCCCGGCTCGGTCCTGGCCGCGATGGTGATCCTG CTCGACTACCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCAGGGGAGGGCAAGAGCGCGCCTCACCCGAACGCCTCGAAGAACGCCAGGGCCCGCGGGTCGCTGGCATAGGCGATGTTGATACGCAGCCAGTCGCTC TCCTCGCCTTCCGGGCTGAAGCCGCTGCCCGGCGACAGCAGCACGTCCAGGCGTGTCGCCACGGCCTGCAATTCGGCGAACGGGTAGTCGCCGATACGGG CCCAGACGAACATCCCGCCGACCGGTTCGGCGAACACCTCCCAGCCGTTGTCCCCAAGCACCCGCAGGGTCGCCGCCATCTGCCGGGTCAGGCGCTGGCG CAGGCGTTGCACCAGCTTGCGGTAACTGCCGTTGGCGAGCATGGTCGAGACCACGCATTCGGCGAAGCGCTGGCTGCCGATGCTGGTGTACATCTTCACA TCCGCCAGGCGCCGGATCAGCTCGGGGCCGGCGATCAGGTAGCCGACCCGTAGCGAGCAACTGAGGGTCTTCGAAAAGCTCGCCAGGTAGATCACCCGGC
Amino Acid Sequence
>fimbrial protein
MEFKTFRRTLLLAAVLFVPAGTSMAANLYAFGGRDIAVPSILPEGSVMSRYTFTPMQLCGKPSCDLIGVSLYNKGSVWDPVDGPDLNTNVPGLSVRLLLD GIPASSRFKGTFSQIAEIQLFRNSTPLSDGQFASGAFNSYFLITYKDGLIASGTSSIRLTGSVTTINATCQVADQTVKLQSIAAARLNGVGTYAAVTPFN LVVAGCPRGYNRVGYSLQAVGGAVAEGSGVLPRLAGSTATGVSIRVTDEAGVPLRMGLSLPVTAYDKNTGGAYWIPMKASYVQTAEKITPGSVLAAMVIL LDYQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site