Strain | Pseudomonas aeruginosa strain AZPAE14955 AZPAE14955_contig_15, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGCAGCTCCATCGCGGGGAGATGGCGCCGGGCCCAGCGGCACGACGCGCAGCCTTCGCTGGTGAATACCAACAGGGACACCCCTTCCAGGGCAAGCAAC TGCCGGTCGGCGTCCAGATCGGTGAGTTCCAGGGACGGCACGCTGCTGACCTCGATAGAAAGGAAGAAATGGATCCCGGCCATCATCCGTATGCTTCGGC TCCTGCGATAGCGCTGGCGCCCTCCTCGGCCAGCGGATCCGGGCAAGGCGCGCCCCTCCGCAGCACCTGCACAATATCGTCCGCGGCGGCCTCGCCTGCA ACTCCGCTGGCAGCCTTGGCCCGGAGCAACGAAGAAAACGTGCGCAGAGCGGGGAAAACACCGGCGAACCGCGTCCCGCCCATTGTCTAGGCCCGGCCCG ACACGTTAAGGTTCGTCTCCCCGTTTGCGAACTTCATGCCTGCGCCCTTTCGCAGGGGGCCTCCCGGCGGCCGGCGCCCGTGACCTGATTGAGTACCACG
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DNA Sequence for Gene |
>NS71_RS15275
ATGGCTGATTTACAGATCGACGACCTTAACGTTGCCTCCAACGAGACCCTGATCACGCCGGAGCAGCTCAAGCGTGAAATTCCCCTGACCGACAAGGCGC TGCAGACCGTGGCCCATGGTCGCCAGGTGGTGCGCGACATTCTGGATGGCAAGGACCACCGTCTGTTCGTGGTGATCGGCCCCTGCTCCATCCACGACAT CAAGGCCGCCCACGAATACGCCGACCGCCTCAAGGCGCTCGCGGCCGAAGTGGCGGATACGCTGTTCCTGGTGATGCGCGTGTACTTCGAGAAGCCGCGT ACCACGGTGGGCTGGAAAGGCCTGATCAACGATCCGTACCTGGACGACTCGTTCAAGATCCAGGATGGCCTGCACATCGGTCGCCAACTGCTCCGCGACC TCGCCGAGAAAGGCTTGCCCACCGCCACCGAAGCGCTCGACCCGATTTCCCCGCAGTACCTGCAGGACCTGATCAGCTGGTCGGCGATCGGCGCCCGTAC CACCGAATCGCAGACCCACCGCGAGATGGCCTCCGGCCTGTCTTCCGCGGTCGGCTTCAAGAACGGCACCGATGGCAGCCTGACCGTGGCGATCAATGCC CTGCAGTCGGTCTCCAGCCCGCATCGCTTCCTCGGCATCAACCAGCAGGGTGGCGTATCCATCGTCACCACCAAGGGCAACCGCTATGGTCACGTGGTGT TGCGCGGCGGCAACGGCAAGCCGAACTACGATTCGGTCAGCGTCGCGCTCTGCGAGCAGGACCTGAACAAGGCGAAAATCCCGCTGAACATCATGGTCGA CTGCAGCCACGCCAACTCCAACAAGGACCCGGCCCTGCAACCGCTGGTGATGGACAACGTCAGCAACCAGATCGTCGAAGGCAACAACTCGATCGTCGGC CTGATGGTGGAAAGCCACCTGGGCTGGGGCAGCCAGCCGATTCCGAAGGATCTCGACCAACTTCAGTACGGCGTCTCCATCACCGATGCATGCATCGACT GGGCGACCACCGAGAAGAGCATCCGCAGCATGCACGCCAAGCTCAAGGACGTGCTGCCGAAACGCCAGCGCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGAGGCGGAAACGAAAACGCCGGGCTGATGCCCGGCGTTTTTCATTGCGCGCCTGCTCAGGCGGCCGGATCGGCCTGACGCTGGCGACGCTCGATGTAA CGCTCCACGTAGGAGCAGGACGGGATCACGCTGTAGCCCATGCGGTCGGCGTACTGCAGGGCGTGTTCGGTCAGCGCGGCAGCGATACCGCGACCCCGCA GCGAATCCGGTACGAAGGTCCGGTAGATGTCCAGCGTCTGCTTGCCCAGGTCCATATACGCCAGATAGGCACGATGGCCATCCACCGTCGTCTCGAACTG ATGGCCGCCCACGTCATGATGGATGGACAGGGACTCGCTCACTTTGGATCTCCTCAACGGGTTCGTAACCCGACCCGCGCCTGATTGATAGGGTTCCTCG CGAGGATGCCCCCGCGTACCGGCCTTCAGCAGGCCGCCGGATAACTTCGTCCGTTCTCGTCCCGGCGGCTGAGCGCGCCTGGCGGACATCCTCGAAACGG
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Amino Acid Sequence |
>phospho-2-dehydro-3-deoxyheptonate aldolase
MADLQIDDLNVASNETLITPEQLKREIPLTDKALQTVAHGRQVVRDILDGKDHRLFVVIGPCSIHDIKAAHEYADRLKALAAEVADTLFLVMRVYFEKPR TTVGWKGLINDPYLDDSFKIQDGLHIGRQLLRDLAEKGLPTATEALDPISPQYLQDLISWSAIGARTTESQTHREMASGLSSAVGFKNGTDGSLTVAINA LQSVSSPHRFLGINQQGGVSIVTTKGNRYGHVVLRGGNGKPNYDSVSVALCEQDLNKAKIPLNIMVDCSHANSNKDPALQPLVMDNVSNQIVEGNNSIVG LMVESHLGWGSQPIPKDLDQLQYGVSITDACIDWATTEKSIRSMHAKLKDVLPKRQRG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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