Pseudomonas aeruginosa AZPAE14955, NS71_RS10175
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14955 AZPAE14955_contig_11, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTCTACATCCTCGCCTTCATGGCGGCGACCCTCGCCTTGTGCCTGGGCGGCTACGCCGGCTACGGCTACCTGCTGGTGGCGGTGGCGGTGAGCCTGTGG TGGCTGGCCATCGCCCTGACCGGCTACTGGACCGCCGACGACCGGGTCTGGGCGCGCAAGCTGTTCGCCTTCTCCATCGTCGCCATCACCGCGCTGAGCG TGATGATGTCCATCGACTTCCAGGTGGCGCCCGCCACCCATCTGGTCGCCTCGCTGTTCTGAGGCGACACGCTTTAGGGAAAGCCCCGCCGGTCGATTGG CGGGGCTTTTTTTTGTCTGCGCGATGGCAGGGATGCGGTCGCCGCCTGGCAGAAGGGCCGCGCGGCGAGCCCTCTGTTCCGGGACTCTGCCGTTGGTTAT CAGATTTTTCCGGGAGCTTTTTCGGAGCTGTCCGGCTTGTGAAAAAAACCCTCCATCAATCAAATGCCAATGATTCTCAATAACCAAGATGGAGTACTTC
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| DNA Sequence for Gene |
>NS71_RS10175
ATGGATCGTCGCAACGAGCCGTCCCCCTTGCCCACCAAACGCCCGCTGGCGCCGCTGATGCTGTTGATGGCCGCCTGCTCCTCGCCGGCCCTGGCCGAGG ACGCGGCGCGCAAGGACGATCCCCTGGAACTGGGAGCCGACACGGTCACCGGCGAGCAGGCGTCGTCCAGGGTCGAACGCTCGGCCTCGGCCAAGTACGC CGTGCCGCTGCTGGATACCCCGCAGACCGTCACGGTGGTGCCGCAAAAGGTGATCCAGGAGCAGAACGCCCTGAGCCTGCGCCAGGTGCTGTCCAACGTC TCCGGCATCACCTTCAACGCCGGCGAGGGCGGCGGCGGTTCCGGCGACAGCATCAACATCCGCGGCTTCAGCGCCAACGCCAACATGCAGGTGGACGGGC TGCGCGACAGCGCCCAGACCAGCCGCAGCGACCTGTTCAACCTGGAGGCGGTGGAAGTGATCAAGGGACCGAACTCGGTGTTCGGCGGCGCCGGCACCAG CGGCGGCAGCATCAACATGGTCAGCAAGCAGCCCAAGGCCGAAGCCTTCACCCACCTGGGCGCCGGACTGGGCACGGACCGCTACCGGCGCCTGACCCTG GACACCAACCAGCCGCTGGAAGGGCTTGGCGAATCGACCGCCTTCCGCCTCAACCTCATGGCCCACCACAACGACGTCGCCGGGCGCGAACAGATCGACA AGCAGCGCTGGGGCATCGCGCCATCCCTGACCTTCGGCCTGGACACCCCGACCCGCCTGACCCTGAGCTACTTCCACCAGCGCGACGACAACCTTCCCGA CTATGGCGTGCCGGCGCTGAACGGGCGCAAGCTGGACGGCGTCAGCCGCCACGATTATTTCGGCTGGCGCAACCTGGACGAGGAACGGATCGACAACGAC GTCGCCACCCTCAAGCTCGAACACGATTTCAGCGACGACTTCCAGTTGCAGAACCTCATCCGCTATTCCCACCTGCATCGGGACACGGTGATCTCCGCCT CCCACGTCAACCAGAAGGGCCTGCCGCCGGGTCGCTACCTGCCGGCGGGACCGCAAGCCTACGGGCGCGATTCGAAGACGCGGATGTGGATCAACCAGAC CAACCTCACCGGCCGCTTCGATACCTTCGGCCTGGCGCATACGCTGATCGGCGGCTTCGAGCTGTCCCGCGAGACCTACGACCGCACCACCTACTCCTAC AACCTGGGCAAGTTCTACCCGGCCAACGGCTTCGACCTGCACAACCCGCCGGGCTACTGGAACGGCCCCACCGACAAGCGCGACAGCGCGCGCAACCGGA CCGAACTGGAGGTCAAGGCGCTGTACGCCTTCGACACCATCGCCCTGGACGAGCGCTGGGACCTCAGCCTGGGCCTGCGCTACGACTGGATCGACGGCAC CTCGCGGAGCACGCCCTCAGGCAAGCCGACGGTGCGCGCCGACAGTTCCGACGGCAAGCTGAGCACTCGGGCGGGGCTGGTATTCAAGCCGCTGGAGAAC GGGCGGCTGTACTTCTCCTACGGCACCTCCTTCAACCCCTCGGCGGAACACCTGGTCACTACCGGCTCGGGCGTGACCGAGGCGACCGGAGGCCTGGCGC CGGAGAAGAACAGTACCTACGAGCTGGGCACCAAGTGGGAGTTCCTCGGACGGCGCCTGGAGCTGGACGCGGCGCTGTTCCAGGTGAAGAAGGAGGACGC TCGCGAACGCCTGGCCGACGGCAGCTACGTGCTTGCCGGCGAACAGCGCGTGCGTGGCCTGGAGCTGAGCGCCAGCGGCAAGCTGAACGAGCACTGGGAC CTCTTCGCCACCTACACCTACCTCGACAGCGAAACCCTGAAATCCAGCAACCCGCAGCGTGAGGGACAGGCCCTGGGCAATACCCCGCCGCGCTCGTTGA GCCTCTGGAGCACCTACGAACTGCCCGAGGGCGTGACCCTGGGCTATGGCGCACGCTACGTCAGCCAGCGCAACGTCACCTCGGTGGACAACGGCAAGCT GGATGCCTACTGGGTGCACAACATGATGCTCGGCTACCAGGCGACGCGCGACCTGAAACTGCAACTCAACCTCGACAACCTGTTCGACAAGGCCTACGTC GAGCGGGTGCGCCAGGTGTACGGCAACCAGTCGCGCTCCTCGGCCATCAAGTATGGCGACGGTCGCACGGCGATTCTTTCGGCGATCTACGCGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGGCAGGCAGGCCATGGAAGCCGGCGCTCACTGCCTGGGCGCCGGTTATTCCCGGCGATTTCCTCTGAACTTTTTCACTGCGGCGCCTATCAACTCCTTT GCAAGTCATTTTTCAGGGAGCCTCTTCGATGGCACGCAAGAACGCAGTGAAAGACAACCTCGAGCAGATTCAGCACCAGAGCTACAGCGAGCTGCAGGAA CTGCTCTCCGAAGCCAACAGCATGCTCGCCGACAGCGCCGCCTTCGCCGGCGACAAGGCCGATAGCGCCCGTGCGCGGATCGGCGCGCTGCTGGAGAAGG CCAACGATGCCCTCGGCAAGGGCGGTAGCGCCGTGGCCGAACGCAGCCGCCACGCGGTGGATGCGACGGAAAGCTATATCGGCGCCAATCCCTGGCAGAC CGTGGCCATCACCACCGCGGTGGGCCTGCTCGCCGGCTTCCTGCTCGGGCGTCGCTCCTGAGCACGCGGTCGGTGCCGCACAACGGACTCGTTACCTTCG
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| Amino Acid Sequence |
>TonB-dependent receptor
MDRRNEPSPLPTKRPLAPLMLLMAACSSPALAEDAARKDDPLELGADTVTGEQASSRVERSASAKYAVPLLDTPQTVTVVPQKVIQEQNALSLRQVLSNV SGITFNAGEGGGGSGDSINIRGFSANANMQVDGLRDSAQTSRSDLFNLEAVEVIKGPNSVFGGAGTSGGSINMVSKQPKAEAFTHLGAGLGTDRYRRLTL DTNQPLEGLGESTAFRLNLMAHHNDVAGREQIDKQRWGIAPSLTFGLDTPTRLTLSYFHQRDDNLPDYGVPALNGRKLDGVSRHDYFGWRNLDEERIDND VATLKLEHDFSDDFQLQNLIRYSHLHRDTVISASHVNQKGLPPGRYLPAGPQAYGRDSKTRMWINQTNLTGRFDTFGLAHTLIGGFELSRETYDRTTYSY NLGKFYPANGFDLHNPPGYWNGPTDKRDSARNRTELEVKALYAFDTIALDERWDLSLGLRYDWIDGTSRSTPSGKPTVRADSSDGKLSTRAGLVFKPLEN GRLYFSYGTSFNPSAEHLVTTGSGVTEATGGLAPEKNSTYELGTKWEFLGRRLELDAALFQVKKEDARERLADGSYVLAGEQRVRGLELSASGKLNEHWD LFATYTYLDSETLKSSNPQREGQALGNTPPRSLSLWSTYELPEGVTLGYGARYVSQRNVTSVDNGKLDAYWVHNMMLGYQATRDLKLQLNLDNLFDKAYV ERVRQVYGNQSRSSAIKYGDGRTAILSAIYAF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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