Strain | Pseudomonas aeruginosa strain AZPAE14955 AZPAE14955_contig_11, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCACTGGGCGGGCAGCGCGTCGCCGCGGGTTCCCGCCACCCTCGACAGGCCAGGGTCGAGGCTTTCCGCGCGTGGCGCGGGTTGGTTGCGGTTCGCGCAG CCCAGCGCGGTGGAGATCCCCAGCGCCAGCGCCACGCAACGCAGATGACTGGCAAGCGGCATTGCCCTGCTCCCGTGTCTGAAAGAGCGGGGAACGGTAA GGCAGGCGCAGGCGGCCTGCGCCGGCAAAAGCGCCAGTCATCGTCGCGAAATGGACAGTCGGCGGATTTTTCAGCGTTGCCGCATCAGGTACGGGCCGCA GCCCGGCCGGGATGGCCAGCAGGGAGATGCGGTGGATCTGCCGGGAGCAGCGGTTCACCCCGCCTTCGACGAGGCGCAGGCGCTGGAACAACTGGTGGGC TAGCCTGCGCCTTGGCGTGGCCGGGGGCCCGCCTTCAACCTGAACGAAGCGTTTCGCCAGGTGGTCGGAACAACAGGTCCCCGTTCCGGAAGCCGAGTCC
|
|
DNA Sequence for Gene |
>NS71_RS09770
ATGCCGCTGCGCCGTGCCGTTTTCGCCATCCTTTTCGCGTCCCTGGGCAGCCCTTTGGTAGCCGCCGAAACACCCCTGCGCCTGGAGCGCCTGGAGCGCT GCGGCGATCTCCTGGCCAGCGAGCGGCAGGAGTGGTGCCTGCGCGTGCGCGGCCTGGGCGCCGGCCTGCCGCGCCTGTTGCTGGACGGCCGCGAACTGCC GGCCACCGCCCTGCGGCGCGAGGGCGACGGCCTGCGGCTCCGCCTGGACCGCCGTGGCCACGCCAGCGGTCCGCTTTGGCTGGAGCAGGGCGGGCGCAGC AGCAATCCGGTATGGCTGACCCTGAACGGCAGTCATGTGCTCGCCGCCGGTCCCGACGATGTGGCGAAGAACATGGATGGCCTGACCACCTACGTCGACC TGGTCAGCCTGTTGATCGAGGAGAACCACGACGGTCGCCGGGAGGCCGAACGCCTGGCCGATAAATATGGCGCGCGGGTGGTCGGCGCGATCCCGCCGTT GAACCTCTACCAGTTGCGCCTGCCGGCGCGCGACCTCGTCCAGCGCGACGCGCTGGTCCTCCGCATCGGCAGCGAGACCAGCGTGGACGCCGTGGTGGTG GAGGAGTCCGCGCCGGAGAAGGGCGAGGAAACCGAGGCGGCGCGCCGGCCCGTGGACAAGCCGGACAGCGACTCCGACGAGTGGGCGGCCAATCGTTTCA TGGACGCGGTGAACTATTACCAGCGTCGGGTCCGCGCCCGCCAGGCGCCGCTGGAGACCCGCCCGGTGCGCATCGGGGTGATCGAGCGCGACGTCGACTT CGACGCTCCCGACTTCGCCGACTACCTCGGCCCCTGCAAGGCGCCCGCACCGCGTACCTGCCTCTACGCGCGCGATGCCGAACGTCCCGACAACCACGGT TCGACGGTCGCCGGCATCCTCGCCGCGCGCTGGGACCAGGGCGGCAACAGTGGTTTCCTGCGTGGGTTGGACCGCGCCAGCCAGGGTTTCGAAGTGATCG TCGAGCGCAATTCGGATGCTGGCATCACGGCCAACGTCGCCGCCTCGGTGAACCTGGTGGAGGATGGCGTGCGGGTGCTCAACTGGAGCTGGGGCATCCA CCGCGTCGGCGCTCGCGACGTCGATGGCGACGAGGTGGATTCGCTGGTGCGCTCGGGGATCGCCATGAGCGGCTACGAGGAGTTGCTCGAGGAGTTCTTC CTCTGGCTGCGCAAGGAGCATCCGGACGTGCTGGTGGTCAACTCCGCCGGCAACGGCTCGTCCTACTCCGGTACCGACGAATACCGCCTGCCGTCCTCCT TCGTCACCGAGCAGTTGTTGGTGGTGGGCGGCCACCAGCGCAGCGAGCGCCAAGGCCTGGCGGTGGACGACCCGGCCTACGCGGTCAAGCGCAGCACCTC GAACGTCGACATGCGGGTGGATGTCACCGCCGCCGCCTGTACCCATGCCTCGACCCTGGAGCGGGACGCGCGGGGCGAGGTGCACTGCGGCACCTCCTAT GCCACGCCGATGGTCGCCGGCACGGTCGCCGCCATGCTTTCCCTCAACCCGCGGCTGCGACCCGAGGAGATCCGCATGCTGCTCCGGCGCAGCGCCATGA CCATCGGCGGCGACTACGATTTCGAGCCGGCCGATGCCGAGGACCTCACCGCACCGATCCTGCCCTCGGAGCGCGGCTACCGCCTGGACCACCGTGACGT CGGCCGCTCGGCGCGGCTGGACATGCAGAAAGCCCTGGACCTGGCGGTGAAGAGCCGCGAGCGCGTGCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GGCGTTCCGCCGTCCCGGGGCCTCACGGCGAGGCTTCCAGCAGCCGGGCGAGGCGTTCGGCGAGTTCGTTGTGGCGGAACGGCTTGGTCAACACCTCGAA GCCGTTGAGTTGCTCGGGCCTGAGGTTGGCGTAGCCGGTGATGACCAGCACCGGCAATTGCGGGAAGCGCTGGCGCAGTTCCTCGGCAAGCTGCACGCCG GTCTTGTCGGCCATGAGATGGTCGGTGACCAGCAGGTCGGGCGCCAGGCCGCGCTCGACCTCGCCCAGGGCTTCCTCCGCCGACGCCGCCTCGCTGACCT GGTAGCCGAGATCGCCGAGCAGCAGCGCGGTGGTGTAGCGCACCATCCTGTCGTCGTCGACCAGCAGCACGTGGGTCGGCCGCGACGCCTCCGGTGCGTC CGGGCAGCTTTCTGCGGTGGATTGCGTCTGCTCCGCGGTGATCGGCAGCCAGATGCTCACCCGGGTCCCCTTGCCGATCTCCGAGTGGATACCCAGGCCG
|
|
Amino Acid Sequence |
>hypothetical protein
MPLRRAVFAILFASLGSPLVAAETPLRLERLERCGDLLASERQEWCLRVRGLGAGLPRLLLDGRELPATALRREGDGLRLRLDRRGHASGPLWLEQGGRS SNPVWLTLNGSHVLAAGPDDVAKNMDGLTTYVDLVSLLIEENHDGRREAERLADKYGARVVGAIPPLNLYQLRLPARDLVQRDALVLRIGSETSVDAVVV EESAPEKGEETEAARRPVDKPDSDSDEWAANRFMDAVNYYQRRVRARQAPLETRPVRIGVIERDVDFDAPDFADYLGPCKAPAPRTCLYARDAERPDNHG STVAGILAARWDQGGNSGFLRGLDRASQGFEVIVERNSDAGITANVAASVNLVEDGVRVLNWSWGIHRVGARDVDGDEVDSLVRSGIAMSGYEELLEEFF LWLRKEHPDVLVVNSAGNGSSYSGTDEYRLPSSFVTEQLLVVGGHQRSERQGLAVDDPAYAVKRSTSNVDMRVDVTAAACTHASTLERDARGEVHCGTSY ATPMVAGTVAAMLSLNPRLRPEEIRMLLRRSAMTIGGDYDFEPADAEDLTAPILPSERGYRLDHRDVGRSARLDMQKALDLAVKSRERVR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|