Pseudomonas denitrificans ATCC 13867, H681_25090
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas denitrificans ATCC 13867, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCGCCGGACACCCGTTGCTTCACTATCCGCAGCATCAGCCTCGAAGGTGCCGAGCACCTCGACGCGCGTTCGCGCGAAGCGCTGCTGGCGCCGTACCAG GGTCAATGCCTGGGCGTGAACCAGCTCAACGAGCTGCTCAAGGGCATCACCGACCACTACCTCTCGCGCGGCTTCGTCACTACCCGCGCCTACCTGCCGC AGCAGGACCTCTCCAGCGGCGAGCTGAAGATCATCGTGGTCGAGGGCCGCTTCGAAGGCTTCGACCAATCGGAGCTGGCCAGCGAGCGCGAGCTGGCCAT GACCTTTCCCGGCGCCACCGGCGAAATTCTCAACCTGCGCGACCTGGAACAACTGGTCGACCAGATCAACCGCCTGCCCTCGCGCCAGCCGCGACAACAA CGGCGACTCGACCTCCGGTGAACAGCAGGCCGGTGTCGGGCTGGACTGGGACAGCCCGCTGGGCCTGGCCGACCAGTTCGGCCTGCGTTACGGCGAGGAT
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| DNA Sequence for Gene |
>H681_25090
GTGGTCAGCGACCACTGGAAGCACTCCGACAACCAGAGCCTGTGGTACAGCGTTCCCTACGGCTGGTGGACCTTCAACTACAGCTACAGCCGCAACTACT ACCGCACCCGCAACGAGGACGCCGGCTTCGCCTTCAAGTACGACGGCGACAACGAGACCCATCAACTGGGCGCCGAGCGCGTACTGTTCCGCGACGACGT GAGCAAGACCGGGGTGAATTTCGGCCTCAGCCACCAGCGCACGCGCAACTACATCGACGACACCCTGCTCGACGTTTCCAGCACCCACCTCAGCGAATTC AGCCTGGGCTTCAACCACGGCCGGCGCGTCGGCAGCGCCTTCGTCAACGCCGACATCGGCTGGCAGCGCGGCGTCGGCGCCTTCGGCGCGCAGGACGACG ACCACGACGCCCCGCACGGTAGCCCCACTGCCCGCTACAACAAGTACAGCCTGACCCTGAGCTACCTGCAGCCGTTCACGCTGTGGGAGCAAGCCTTCAG CTTCGAAAGCCTCGCCACCGGCCAGCACAGTGAAGACGTGCTCTACAGCCCGCAGCGCATCAGCCTGGGCGGCCTCAGTTCGATCCGCGGCTTCAAGGAC CAGACCCTCTCCGGCGACTCCGGTTACTACTGGCGCAATCAGCTGCGCTGGCGCCGCGCCGTGACCTGGGAGCCGCTGCTGCCCTGGGTGCAGGAGTACG GCGTGGCCTATGCCTACGACTTCGGCGTCATCGAGCACGGCCAATACAACCCGGGCCTCTCCGGGCGCATGAGCGGCCATGGCCTGGAGTTCAGCGCACG CGGGCAGTACGCCGCCGCCTCTGTGACCCTGGCGCGCTCCCTGGAGCGCCCCGACATCATCGAGCGACGCGAGCACCCGGTGTATTTCCGCGTCGACCTC TTCTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCGATTCGCTCTTTAGCTAGTAGCTGGCATCTGCCGGCACTTGGGAGATTCCCACATGGACGTACGCCACCCGCTGTACCAGGCCATTGCCAGCGTGCT TTCCGGCATCCTGATCCTCAACCCCATCGTTGCGGCAGCGGCCGAGCTGGCGGTGGATGCGGCAGCCGGTGGCAATACGCACCTGGGCGCGGCGGGCAAC GGCGTGCCCGTGGTGAACATCGCCACGCCCAACGGCGCGGGCCTCTCCCACAACAGGTTCAGCGACTACAACGTCGGGCAGAACGGCCTGATCCTCAACA ACGCCACCGGCAAGACCCAGTCCACCCAACTGGGCGGGATCATCGTCGGCAACCCGAACCTCAAGGGTGGCGCGGCCAACAAGATCCTCAACGAAGTCAC CGGGGCCAATCCCTCGCAGCTGCGCGGCTACACCGAAGTGGCCGGGCAGGCAGCCCACGTCATCGTCGCCAACCCCCACGGCATCACCTGCAACGGCTGC
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| Amino Acid Sequence |
>putative hemolysin activation/secretion protein
MVSDHWKHSDNQSLWYSVPYGWWTFNYSYSRNYYRTRNEDAGFAFKYDGDNETHQLGAERVLFRDDVSKTGVNFGLSHQRTRNYIDDTLLDVSSTHLSEF SLGFNHGRRVGSAFVNADIGWQRGVGAFGAQDDDHDAPHGSPTARYNKYSLTLSYLQPFTLWEQAFSFESLATGQHSEDVLYSPQRISLGGLSSIRGFKD QTLSGDSGYYWRNQLRWRRAVTWEPLLPWVQEYGVAYAYDFGVIEHGQYNPGLSGRMSGHGLEFSARGQYAAASVTLARSLERPDIIERREHPVYFRVDL FF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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