Pseudomonas denitrificans ATCC 13867, H681_23625
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas denitrificans ATCC 13867, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCAACACCCCGGCCGACAAGCTGGACCGCCTCAAACCCTTCCAGCTGTGCTCGCCCAAGGCGCTGCAACTGCGCTCCAAGGTGTGGACCAAGCTGAAGAA ATGACCCGCAGGTCACCCGGCGCGGCGGTGCGCGCCGGGTGGCTCTGACAGCCAATTTGGCCATCTCGATCCCTTTTTGACCCTTTGCAAGGTTCTGCCC GGCCCCCTCGGTTGCTAGAGTCGGGCGGCTCGCGCAGGGAGCGGCTGGAAAGGCGGCCAGCTCCGGCGCCACCTGACTGGCGCAGGAAAATCCCAAGGGA ACGCGAGCGCGTTATCCACAAGAACAAAGTCCCCGAGAACGCCCATGACCAGCTTTTGCGTCACCCTGCTGCACAGCCCTTCATTCCTCGCCCGTCGTCG CTGCTGCGGCTGATCCGCAGCCCGACGACAACCGGGCGGCCGCCGATCGCCGTCCCATCGCGCTCCATACAAAAGCCAGAACAATCGCGAGGAATCCCCA
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| DNA Sequence for Gene |
>H681_23625
ATGGCCAGCCAACACAGCGCCAGCACTGCACACACCATCAAGGGTGACGCGGCCTCCGCCGACGCCCGCCTGAAACGCGTCCTGGGCCTGCCCGCCCTGG TCTTCTTCGGCCTGGTCTACATGGTCCCGCTGACCATGTTCACCACCTATGGCGTGGTCACCGAGATGACCGGCGGGCGTACCGCCAGCGCCTACCTGAT CACCCTGCTGGCGATGCTGTTCACCGCCGCCTCCTACAGCTTCATGGTGCGCAAGTACCCCATTGCCGGCTCGGCGTACTCCTACACCAGCCTGAGCTTC GGCCCGGCGGTCGGCTTCCTGTCCGGCTGGTCGCTGCTGCTCGACTACCTGTTCCTGCCGATGATCAACTACCTGCTCATCGGCCTGTTCATGAACATCG CCTTCCCGGAAGTCCCGGCCTGGGTGTTCGTGGTCGCCTCCATCACCCTGGTCACCGTGCTCAACGTGGTCGGCATCAGCCAGGTGGCGGGCATGAGCAA CGTCATCGTCGGCGCTCAGCTGGTGTTCATCGTGGTGTTCGTGGTGATGTCGATCAAGAGCCTGGCCGGTGGCGCCGCGATCGACTTCAGCCTGCCCTTC GTCGGCGACGGCAGCCAGCCCGGCTTCGCCCCGCTGATGGCTGGCGCCGCAGTGCTCTGCCTGTCGTTCCTGGGCTTCGACGCCGTCTCGACGATGGCCG AGGAAACCCGTGACGCCCGCCGCGACATCCCGCGCGCGATCATCATCACCACTGTCATCGCCGGCCTGATGTTCACCCTGCTGGCTGTGATCAGCCAGTT GGTGTTCCCCGGCAGCGTGTTCCAGAACGCCGACTCGGCGGCCAATGAGGTGATGCTCAAGGCCGGCGGGCAGTTCCTGACCAACTTCTTCACCGCCGCC TACATCGCCGGCTGCATCGGCTCGGCGCTGGCCTCACAGGCCTCGGTGTCGCGCATCCTGTTCACGATGGGCCGCGATGGCATCCTGCCGCGCAGCCTGT TCGGCGTCCTCCACGCGCGCTTCCAGACCCCGGTGGTGGCGATCCTGGTGGTCTCGGCGGTTTCCCTGCTGGCCATCGTGCTGGACCTGACCACCCTCGC CTCGATGATCAGCTTCGGCGCCCTGGTGGCCTTCTCCGTGGTCAACCTGGCGGTGATCCGCACCTACCTGGGCGTCGAACGCCGCCGCGGCGCCGGCAAC CTGCTGAAGTACGGGCTGATTCCCTTCATCGGCCTGTGCCTGACCCTGTGGCTGTGGACCAGCCTGTCGCAGCTGACCCTGATCGTGGGCCTGAGCTGGT TCGCCATCGGCTTCACCTACCTGGCGCTGCACACCGGCGGCTTCCGCCGCAAGGCGCCGAGCGTGAACTTCGAGGAAAACGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCTGTGTTCGACGCGGCGCCGGGCCATGCCCATTGCTGCGTTGAACGCGACCCGACAACCGGAACCAGCGGGCGCCACCCGGCGCCATGAGGAGCGCGT GATGTTGACGATCTACACCGACGACCATCGCTTGCACCACGGTCAGCACGAGCTGATCGGCGGCCAGTTCACTCCCTGCTTCGAAAAGCCCAGCCGCGCC GACATGGTGCTGGACCGGGTCAAGGCGGTGAAACTGGGCGACATCCAGCCGCCGCGCGACTTCGGGCTGGAGCCGATCCTGCGGGTGCACGACGAAGGCT TCGTGCGCTTCCTGCAACACGCCTGGCGCGACTGGCTGGCCACCGGCCGCACCCACGACATGCTGCCCATCGCCTGGCCCACCCGGCGCCTGCGGCAGAA GGAGCCCGACAGCATCGACGGCCGCCTGGGCTACTACTCCTTCGACGCCGGCGCACCGATCACCGCCGGCACCTGGCAGGCGATCACCAGCTCGGTGAAC
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| Amino Acid Sequence |
>putative transporter
MASQHSASTAHTIKGDAASADARLKRVLGLPALVFFGLVYMVPLTMFTTYGVVTEMTGGRTASAYLITLLAMLFTAASYSFMVRKYPIAGSAYSYTSLSF GPAVGFLSGWSLLLDYLFLPMINYLLIGLFMNIAFPEVPAWVFVVASITLVTVLNVVGISQVAGMSNVIVGAQLVFIVVFVVMSIKSLAGGAAIDFSLPF VGDGSQPGFAPLMAGAAVLCLSFLGFDAVSTMAEETRDARRDIPRAIIITTVIAGLMFTLLAVISQLVFPGSVFQNADSAANEVMLKAGGQFLTNFFTAA YIAGCIGSALASQASVSRILFTMGRDGILPRSLFGVLHARFQTPVVAILVVSAVSLLAIVLDLTTLASMISFGALVAFSVVNLAVIRTYLGVERRRGAGN LLKYGLIPFIGLCLTLWLWTSLSQLTLIVGLSWFAIGFTYLALHTGGFRRKAPSVNFEENA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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