Pseudomonas denitrificans ATCC 13867, H681_22845
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas denitrificans ATCC 13867, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GACGCCGCCCCGCTATCGATACCCAAGGACTGACACCGGAGCGCCTGGCCGGGTGATTTCTCTCTCGATTTGGAGACACGACATGCAACTGACCCGCATC GCCACCAATGAACGCCTCTCCGGCGCTATGGTCTTCGGCGCGCTGGTGTTCCTCTCCGGGCAGGTGCCCGGCCAGGCCACCGACATCCAGGGCCAGACCC GCGAGGTGCTGGCGAAGATCGACGCGCTGCTGGACGAGGCTGGCACCGACAAGGCGAACATTCTCAGCGCAACCCTCTACCTGAAGGACATCGCCGCCGA TTTCGAGGCCATGAACGGCGTCTGGTCGGCCTGGCTGCCCGCAGGCTGCGCGCCGACCCGCACCACCGTGCAGGCGCTGCTCGCGCGGCCGCAGGTGTTG GTGGAAATCACGGTGATCGCCGCGCGGCCCTGAACAGAACCTCGATACGACTCACAACAACAAGAGAGGCACGCAATCCATGAAACGACTTGCACTGGGA
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| DNA Sequence for Gene |
>H681_22845
ATGCTGGCGGCGTCCAGCCTGGTCTGCGCGCTGGCGCAGGCCAACGAGGCGCTGGACGGCACGCTGAAGAAAGTGGCTGATCGCGGCACGATAACCCTGG GTTATCGCGATGCCTCGGTGCCGTTCTCCTATCTCGGCGACAACAGCGGCCAGCCGATGGGGTACTCGGTGGAGCTGGCCGGCAAGGTGGTCGAGCGCGT GAAGCAGAAGCTGAACCAGCCGGACCTGAAGGTGAAGTACAACCTGGTGACCTCGCAGACGCGCATCCCGCTGGTGCAGAACGGCACCGTGGACCTGGAG TGCGGCTCCACCGGCGTCACCGCCGAGCGCCTGAAGCAGGTCGCCTTCTCCTACGGCTTCATCTACGTGAAGGGCCAGTTGCTGACCGCCAAGGACAGCG GCATCCAGGGCTTCGACGACCTCAAGGGCAAGAACGTGGTGACCACCGCCGGCACCACCAACGAGCGCTACCTCAAGGCCTACAACGCCGAGCACAAGCT GGACATGAACGTGGTCAGCGCCAAGGACCACGGCGAAGCCTTCCTCATGCTGCAGTCCGGCCGCGCGGTGGCCTTCTACATGGACGATGCGCTGCTCTAC GGCGAGAAGGCCAAGGCGCGCGACCCGCACCATTGGGTGGTGGTGGGCGAGCCGCAGTCGCGGGAAATCTACGCCTGCATGGTGCGCAAGGACGACCCGC AGTTCCTTGCCCTGGTCAACCAGACCCTGGCCGACCTGTACGCCTCGGGCGAGATCAAGGGCATCTATCGGCGCTGGTTCGAGCAGCCGATCCCGCCGAA GAACCTCAACCTGGAGTTTCCGATGACCGCCGAGCTGCAGGCGATCATCGCCAAGCCCACCAGCGAACCGGTGCAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCCGTCAGCGTTGCAGGCCGAGGTGGCGGATTACCGGCTGCGCCTCGGCCAGACGTTCCCAGACGTCGTCGAGCAATTCGGCGGGGTAGTAGGAGGGCA GGCGCGGCAGTTCCTGGCGCGGCACCCAGGCGACCTCGCGGATATCGAATTCGTCGCCGCCCAGGCCGCGCAGGTTGTCCAGGCTGACCCGACCATCCCA GGCGTCCACGCGGTAGAACAGCTCCATGTGGAAGCGCCCGGCCAGCGGTTCGGCGAACTCGCGGACATAGACCAGCGGGCCGACGTCCACGGCGAGGCCG GTTTCCTCGAAGCATTCGCGGCGCACCGTGTCGCGGGTGGATTCGTCCTTGTTCGACTCGAAACCGCCGCCCGGCGGGATCCAGTACTCCTCGCCGGCCA CCTCGTGGCGCACCAGCAGGATGTGTTCCTCGCGTACCAGCAGGCCGGCGGCGCGAATGCGGTGTTGCAGGGGGGAAGTCATTGCCAGTCGAGCCTCGCC
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| Amino Acid Sequence |
>ABC transporter substrate-binding protein
MLAASSLVCALAQANEALDGTLKKVADRGTITLGYRDASVPFSYLGDNSGQPMGYSVELAGKVVERVKQKLNQPDLKVKYNLVTSQTRIPLVQNGTVDLE CGSTGVTAERLKQVAFSYGFIYVKGQLLTAKDSGIQGFDDLKGKNVVTTAGTTNERYLKAYNAEHKLDMNVVSAKDHGEAFLMLQSGRAVAFYMDDALLY GEKAKARDPHHWVVVGEPQSREIYACMVRKDDPQFLALVNQTLADLYASGEIKGIYRRWFEQPIPPKNLNLEFPMTAELQAIIAKPTSEPVQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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