Pseudomonas denitrificans ATCC 13867, H681_21140
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas denitrificans ATCC 13867, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAGATGGTGCGTGATGCCGAGGCGAATGCCGAGGAAGACCGCAAGTTCGAGGAACTGGCCGCTGCCCGCAACCAGGGTGACGCACTGGTCCACGCCACTC GCAAGATGGTCACCGAGGCTGGCGACAAGGCCACCGCCGAGGAGAAAGCCGCCATCGAGAAAGCGCTCGGCGAGCTGGAAGTTGCCGTGAAGGGCGACGA CAAGGCCGAGATCGAAGCGAAGATGAACGCGCTGTCCCAGGCGTCCACCCCGCTGGCGCAGAAGATGTACGCCGAACAGCCGCAGCCGGGCGCTGCCGCT CAGGGCGAGGCCGCTGACGACAAGGCGGGTGACGATGTCGTCGACGCCGAATTCGAAGAGGTCAAGGAGAACAAGTAAGCCGCGTGCAAGCTTGCGCTCC AGCGCACCGGCCCGCGTGTCGGTGCGCATGAAACGTCACGCGGGGGCTTGCTCCCGCGTCGGCGTGTCTGGGGGAGAGGTTTTCGAGGTGCAGGAAAGTT
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| DNA Sequence for Gene |
>H681_21140
ATGGCCAAACGTGATTTTTACGAGGTACTGGGTGTCGAGCGTGGCGCCAGCGAGTCGGACCTGAAGAAGGCCTACCGCCGGCTGGCCATGAAATTCCACC CGGACCGCAATCCCGGCGACAAGGAGGCCGAGGACAAATTCAAGGAGGCCAACGAGGCGTACGAGGTTCTGTCCGACGCCAGCAAGCGCGCGGCCTACGA CCAGTACGGCCATGCCGGCGTCGATCCGCAGATGGGCGGTGCCGGTGCGGGCTTCGGTGGTGCGAGCTTCTCGGACATCTTCGGCGATGTCTTCAGTGAC TTCTTCGGTGGTGGTGGCGGACGCGGCGGTTCCCGTGGCGGCCCGGCGCGCGGCGCCGACCTGCGCTACACCCTCGACCTGGACCTGGAAGACGCGGTTC GCGGCACCACCGTGACCATTCGCGTCCCGACCCTGGTCGGTTGCAAGACCTGCAGCGGCAGCGGCGCCAAGCCCGGCACCACGCCGGTCACCTGTACCAC CTGCGGTGGTATCGGCCAGGTGCGCATGCAGCAGGGCTTCTTCTCGGTGCAGCAGACCTGCCCGCGCTGCCACGGCAGCGGCAAGATGATCACCGACCCC TGTGGTTCCTGCCACGGTCAGGGTCGCGTGGAAGAACACAAGACCTTGTCGGTGAAAGTGCCGGCGGGCGTCGATACCGGTGACCGCATCCGCCTGACCG GCGAAGGCGAGGCTGGCGCCCACGGTGGCCCGGCGGGCGACCTCTACGTGGTGGTGAACGTGCGCGAGCACGACATCTTCCAGCGCGACGGCAAGCACCT GTACTGCGAAGTGCCGATCAGCTTCGCCGATGCTGCGCTGGGCGGCGAACTGGAAGTGCCGACTCTGGATGGCCGCGTGAAGCTGAAGATTCCCGAGGGC ACTCAGACCGGCAAGCTGTTCCGCCTGCGCGGCAAGGGTGTCGCCCCGGTGCGCGGTGGCGGTGCCGGCGACCTGATGTGCCGCGTCGTCGTGGAGACTC CGGTGCAACTGGACAAGCGCCAGCGCGAGCTGCTCGAAGAGTTCCGCAATACCCTGCAGGGCAACTCTTCCAATTCGCCCAAGGCCAGTGGCTGGTTCGA AGGCATGAAGCGCTTCTTCGACGATCTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTTTCTCGAGCCGCAAGCTGCAAGCGACAAGCTCCAAGGGGCGGCGCTTGCAGCTTGCAGCTTGTTGCTTGGAGCTGATGTTATGCGACGTATTGCCGTA ATGGGCGCCGCCGGGCGCATGGGCAAGACCCTGATCGAGGCGGTGCAGCAGACGGGCGGCAGCGCCGGCCTGACCGCGGCGGTCGACCGCCCGGACAGTA CTCTGGTCGGTGCCGATGCCGGTGAGCTGGCCGGCCTGGGCCGCATCGGCGTGCCGCTGTCGGGCGACCTGGCCAAGGTGGTCGACGAGTTCGACGTGCT GATCGACTTCACCCACCCGACCGTGACCCTGAAGAATCTGGAAGTCTGCCGCAAGGCGGGCAAGGCGATGGTTATCGGCACCACTGGCTTCACCGTCGAG GAGAAGGCGCTGCTGAGCGATGCGGCCAGGGACATCCCGATCGTCTTCGCCGCCAACTACAGCGTGGGCGTGAACCTCTGCCTGAAGCTGCTCGATACCG
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| Amino Acid Sequence |
>chaperone protein DnaJ
MAKRDFYEVLGVERGASESDLKKAYRRLAMKFHPDRNPGDKEAEDKFKEANEAYEVLSDASKRAAYDQYGHAGVDPQMGGAGAGFGGASFSDIFGDVFSD FFGGGGGRGGSRGGPARGADLRYTLDLDLEDAVRGTTVTIRVPTLVGCKTCSGSGAKPGTTPVTCTTCGGIGQVRMQQGFFSVQQTCPRCHGSGKMITDP CGSCHGQGRVEEHKTLSVKVPAGVDTGDRIRLTGEGEAGAHGGPAGDLYVVVNVREHDIFQRDGKHLYCEVPISFADAALGGELEVPTLDGRVKLKIPEG TQTGKLFRLRGKGVAPVRGGGAGDLMCRVVVETPVQLDKRQRELLEEFRNTLQGNSSNSPKASGWFEGMKRFFDDL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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