Pseudomonas denitrificans ATCC 13867, H681_20160
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas denitrificans ATCC 13867, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCGGCCGATGCCCAGCGCCGGGGCGCCGCTGGCGTCGACCTTGCCCATCAGGGCGTTGGTGTTGGCCAGGCCCTTGGCGACGGTCAGCGGGTACTCCAGT TCGCGCTGGATCTGGCTGACCTGGCCGCGCGCCAGGGCCTCCAGGCGTTCGTTGATCACCTGTTCGAGCAGCGCCTGGGTGCGCTCCTGCACCAGGGTCT GGGTCCGGGCCCCGGCGAACAGCGCGTACAGCACCAGGGCCGCGACCACCGCCAGGACACTGGCTCCGGCCAGCGCCACCACGGAAAACTGGATCGACTT GAATTTCATACGGGTACCCGAGTGCTCCAGAGCCTGCGTGTCCCTTCTTATCGGCAGGACCGGGCGGATTCCTTAGCCGGGCGTTGTAATGGGTTGTAAC GCGGGTATGCACCGCCTGTTGCAGGGTGGTTGCCGGCCACCGGGGGCCGGCCTACCATGCGCGCTGTCCTTGGGAGATTGCACGGTTTCAGGAGAACAGC
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| DNA Sequence for Gene |
>H681_20160
ATGCCCAGTCTTTTCCGTGTCGCCGGCCTGGCCGCGGCCCTGCTGCTGAGCGCTTGCCAGCAGGTGAACACCACCAGCGGCGGCGTCGTCGGCGTCGATC GCAAGCAGAATATGTTCAGCATGCTGTCCAGCGCGCAGGTTGACCAGATGTACGCCCAGTCCTACCAGCAGACCCTCGGCGAAGCGTCGAAGGCCGGCAA GCTGGACGCCAGCAGCAGCGATGCCAAGCGCGTGAAGGCCATCGCCAGCCGACTGATTCCGCAGACCGGGGCCTTCCGGCCGGATGCGCCGTCCTGGCAG TGGGAAGTCAACGTGATCAAGAGTGACGAGCTCAACGCCAACTGCGGCCCCGGTGGCAAGATCATCGTCTACACCGGGCTGATCGATAAGCTGAAGCTGA CCGATGACGAGCTCGCCGCGGTGATGGGCCACGAGATCGCCCACGCCCTGCGCGAGCATGGCCGCGAGGCCATGTCCCGCGCCTATGCCGAGCAGATGGG CCTGGGTATCGGCGGTGCCTTGCTGGGCCTGGGCCAGGGCAGCGTCGACCTGGCCCACCAGGTCGTCGAATACAGCCTGACCCTGCCCAACAGCCGGCAG AACGAGAACGAAGCCGACCTGATCGGCCTGGAACTGGCCGCTCGCGCCGGCTATAACCCCAACGCCGCAATGACGCTGTGGCAGAAGATGGGGCAGGCGG CCGGTGGCGACGCGCCGCCGGAAATCCTCAGTACCCACCCGGCCGACAGCACCCGGATGGCCAACCTGCAGGCAGCCATTCCGAAGGTGATGCCACTGTA CGAGCAAGCCAAAGGCCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGGCCCGCCAGGCGCGGCGCGTGGTAGCGCCGCTGTGCAACGTGAACAGGGAGCGCCCGTGAAAATTGCTGTACTCGGAGCCACAGGGCTCCTGGGCCA TCATGCCGCCCGGGCCATCAAGGCCGCGGGACACCAGCTGGTGCTGATCCACCGGCCGTCGTCACAGATCCAGCGCCTGGCTTATCTCGAGCCGGAGTAC CGGGTGGCCGAACTCTTCGATCACCAGGGCATGGCCCGCGCGCTGAGTGGCCTGGACGCAGTGATCTTCAGCGCCGGCTACTACCCGGTGCGGCCGCGTC GCTGGCAGGAGGAAGTGGCCAGCGCCCTGGACCAGACCAATCATTTCTACGCGGCCTGCCTGCAGGCGAAGGTGCCGCGCATCCTCTACGTCGGTTCGGC CTTCGCCATGCCGCCTCACCCGCAGGGGCTGCCGGGGCACGAGGGGCTGTTCTACGAAGGACTGCCCACCGGCAAGAGCGCCTACGTGATGTGCAAGTGG
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| Amino Acid Sequence |
>putative lipoprotein
MPSLFRVAGLAAALLLSACQQVNTTSGGVVGVDRKQNMFSMLSSAQVDQMYAQSYQQTLGEASKAGKLDASSSDAKRVKAIASRLIPQTGAFRPDAPSWQ WEVNVIKSDELNANCGPGGKIIVYTGLIDKLKLTDDELAAVMGHEIAHALREHGREAMSRAYAEQMGLGIGGALLGLGQGSVDLAHQVVEYSLTLPNSRQ NENEADLIGLELAARAGYNPNAAMTLWQKMGQAAGGDAPPEILSTHPADSTRMANLQAAIPKVMPLYEQAKGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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