Strain | Pseudomonas aeruginosa strain AZPAE14963 AZPAE14693_contig_7_Average_coverage:_112.46, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCTTCCAGCTGGTGGAGTCCAGCGAGGCCGGGATGCTCACGGCGGTGAAGCGGGCGATCAAGCGCAAGCAGTGGGTGGTGTTCTTCGGCTGGAAGCCGCA TCCGATGAACCTGCAGATCGACATGACCTACCTCACCGGCAGCGAGGATGTGTTCGGTCCCGACGAAGGCGCGGCCACCGTCTCCACCATGACCGCCGCC GGCTACCAGGCGCAGTGCGGCAACGTCGCCCGGCTGCTGCACAACCTGCGCTTCAGCAGCGCCCAGGTCAGCCAGGTGATGGCGCCGATCCTCGATCGCA CCCAGCCCCTCGACGCCGCGCGGCAGTGGCTGAAGGCCAACCCCGAGCCGCTGAAGGCCTGGCTGGATGGCGTGAGCACCTTCGACGGCAAGGACGGCCT GGCCGCGCTCCAGGCCTCGCTGAAGTAACCCGCACCTATCCGTTCCGCCCGGCGCGGCCGGGCGGGGCTTCGTACACCCCGAATACAGGAAGCTACCACC
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DNA Sequence for Gene |
>NS79_RS07455
GTGAACCATGAAGTCATCGTCACCTGCGCGGTGACCGGCGCCGGCGATACCGTCGGCCGGCATCCGGCGATCCCGGTCACTCCGAAACAGATTGCCGAGG CCGCCATCGAGGCGGCCAGGGCCGGCGCCACCGTCGCCCACTGCCATGTCCGCGACCCCGCCACCGGCAAGCCCAGCCGCGACGTGGCACTGTACCGTGA AGTGGTCGAGCGTATCCGCGAAAGCGACACCGACGTGATCATCAACCTCACCGCCGGCATGGGCGGCGACCTGGAGATCGGCAAGGGCGAGCAGCCCCTG GAGTTCGGTGCCGGCACCGACCTGGTCGGCCCGCTGGAGCGGCTCAGGCATGTCGAGGAGCTGCTGCCGGAAATCTGCACCCTGGACTGCGGCACCCTCA ATTTCGGCGACGGCGACTACATCTACGTCTCCACCCCTGCGCAACTGCGCGCCGGCGCCCGGCGCATCACCGAGCTGGGGGTCAAGGCCGAGCTGGAAAT CTTCGATACCGGCCACCTCTGGTTCGCCAAGCAGATGCTCAAGGAAGGGCTGCTGGAGGATCCGCTGTTCCAGATCTGCCTGGGCATTCCCTGGGGCGCG CCGGCCGATACCACGACCATGAAGGCGATGGCCGACAACCTGCCGCCGGGGGCGACCTGGGCCGGCTTCGGCATCGGCCGCACGCAGATGCCGATGGTCG CCCAGGCCATGTTGCTGGGCGGCAACGTGCGGGTCGGCCTGGAGGACAACATCTGGCTGGACAAGGGCGTGCCGGCGAGCAACGGCAGCCTGGTGGAGCG CGCCATCGAGATCATCGAGCGCCTCGGCGGGCGCGCCCTGAGCCCGGCGGAAGGGCGCCGCAGGATGAACCTGAAGCCGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTTCTTCCTCCCCGCCCCGTCGGGGGCGGGAACAACTTCTGGAGATGTCCATGTCCTTCGTCACCGAGATCAAGACCTTCGCCGCCCTCGGTAGCGGCGT CATCGGCAGCGGCTGGATCGCCCGCGCCCTGGCCCACGGCCTCGACGTCGTCGCCTGGGATCCGGCGCCGGGCGCCGAAGCGGCGTTGCGCGCGCGCGTC GCCAATGCCTGGCCGGCCTTGCGGAAACAGGGCCTGGCGCCCGGCGCGGCGCAGGAGCGCCTGCGCTTCGTCGCGAGCATCGAGGAATGCGTGGGCGACG CCGATTTCATCCAGGAGAGCGCCCCCGAGCGGCTCGACCTGAAGCTCGACCTGCACGCCAGGATCAGCGCCGCGGCGCGGCCCGACGTGCTGATCGGTTC CTCCACCTCGGGCCTGCTGCCCAGCGAGTTCTACGCCGAGGCGAGCCACCCCGAGCGCTGCCTGGTCGGCCACCCGTTCAACCCGGTCTACCTGCTGCCG
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Amino Acid Sequence |
>hypothetical protein
MNHEVIVTCAVTGAGDTVGRHPAIPVTPKQIAEAAIEAARAGATVAHCHVRDPATGKPSRDVALYREVVERIRESDTDVIINLTAGMGGDLEIGKGEQPL EFGAGTDLVGPLERLRHVEELLPEICTLDCGTLNFGDGDYIYVSTPAQLRAGARRITELGVKAELEIFDTGHLWFAKQMLKEGLLEDPLFQICLGIPWGA PADTTTMKAMADNLPPGATWAGFGIGRTQMPMVAQAMLLGGNVRVGLEDNIWLDKGVPASNGSLVERAIEIIERLGGRALSPAEGRRRMNLKPR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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