Strain | Pseudomonas aeruginosa strain AZPAE14963 AZPAE14693_contig_5_Average_coverage:_74.31, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCTGCGCGGCCTGGCTTCCGAGGGCGCCGAGCGCCTCGGCCCGCTGGCGCGCTTCGCCGATTACCTCTGGCACCTGGCGCTGCCGGTGGGTTCGCTGGTG GTCGGCGGTTTCGCCAGCCTGACCCTGCTGACCAAGAACAGCTTCCTCGACGAGATATCCAGGCAGTACGTCGCCACCGCTCGCGCCAAAGGGCTCAGCG AGCGCCGGGTGCTCTACGGCCATGTGTTCCGCAACGCCATGTTGCTGGTGGTGGCCGGGCTGCCGGCGGCGCTGGTCTCGGTGTTCTTCACCGGGTCGCT GCTGATCGAGGTGCTGTTCTCCCTCGACGGCCTCGGCCTGATGGGCTACGAAGCGGCGCTCGGCCGCGACTACCCGGTGGTGTTCGGCAGCCTGTTCATC TTCACCCTGCTCGGGTTGCTGGTGAAGCTGGCCGGCGACCTGGCCTACAGCCTGGTCGACCCGCGCATCGACTTCGCCGCGAGGAAACAGTGAGATGGCC
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DNA Sequence for Gene |
>NS79_RS04735
ATCGTCCTTTCCCCGCTGCACCGCCGCCGCCTCGCCGCGTTCCGCGCCAACCGCCGCGGGCGCCTGGCGCTGCGGCTGTTCCTCGCGCTGTTCGTCACCT GCCTGTTCGCCGAGCTGATCGCCAACGACCGCCCGCTGCTGCTGGAATACCGTGGCCAGTGGTTCCTGCCGGTGCTGCGGGACTATCCGGAAACCGCCTT CGGCGGCGAGCTGCCGTTCCCGCCGGACTACCGCGGCCGCTTCATGAGCGAACGCATCGCCCGCGACGGCTGGGCGCTGTGGCCGCCGATCCGCTTCGAC GCGCGCAGCATCAACTACGCGCGCCCGGCGCCGGCGCCGCCCTCGGCGGAGAACTGGCTGGGCACCGACGACCAGGGCCGCGACGTGCTCGCGCGGGTGA TCTACGGCCTGCGCCTGTCGATCCTCTTCGCCCTCGGCCTGACCCTGGCCTCGTCGTTGCTGGGAATCTGCGCCGGCGCGGTGCAGGGCTACTACGGCGG CTGGATCGACCTGTTCGGCCAGCGCTTCATCGAGGTCTGGTCGGGTCTGCCGATGCTTTACCTGCTGATCATCCTCGCCAGCCTGGTGCAGCCCGGGGTC GGCTGGCTGCTGGCGATCATGCTGCTGTTCTCCTGGACCAGCCTGGTCGACGTGGTTCGCGCCGAGTTCCTGCGCGGTCGTCACCTGGAGTACGTCAAGG CGGCGCGAACCCTCGGCCTAGGCGACGCCGGGGTGATGTTCCGGCACATCCTGCCCAACGCCATGGTCGCGACCCTGACCTTCCTGCCGTTCCTGCTCTG TGGCGCGGTGACCACCCTGACCGCCCTGGACTTCCTCGGTTTCGGCCTGCCGCCCGGCTCGCCGAGCCTTGGCGAACTGGTCGGGCAGGGCCGCGACAAC CTCCAGGCGCCCTGGCTCGGGCTGACCGTGTTCGTGGTCCTGGCGACCTTGCTCAGCCTGCTGGTGTTCATCGGCGAAGCGGTGCGCGACGCCTTCGATC CGAGGAAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GATGAACCGGGAACTGTTGCGAGTGGAAAACCTGAGCGTCGCCTATGGCGACACGCAGGTCGTGAAGGGGATCGACTTCAGCCTGCGCGCCGGCGAGACC CTGGCCCTGGTCGGCGAGTCCGGCTCCGGCAAGTCGCAGACCGCCCACGCCCTGCTGCGCCTGCTGCCGGGCGCGGCGCGCCTGGGCGGCAGCGTGCGCC TGGACGGCGAGGAACTGCTCGCCCTGTCGCCGCAGGCATTGCTGGCGATTCGTGGGCAGCGCATCGGCATGGTGTTCCAGGAGCCGATGACCTCGCTCAA TCCATTGCAGCGCATCGGCCGCCAGGTCGGCGAGGGCCTGCGCCTGCATCGCCGCCTGCGTGGCGCCGCGCTGCGCGGGCGGGTACTGGAACTGCTAGAA CTGGCCGGCCTCGAGCAGCCGCGACGCCTGCTCGAGGCCTATCCGCACCAGCTCTCCGGCGGCCAGCGACAGCGAGTGATGCTGGCCATGGCGCTGGCTT
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Amino Acid Sequence |
>ABC transporter permease
MVLSPLHRRRLAAFRANRRGRLALRLFLALFVTCLFAELIANDRPLLLEYRGQWFLPVLRDYPETAFGGELPFPPDYRGRFMSERIARDGWALWPPIRFD ARSINYARPAPAPPSAENWLGTDDQGRDVLARVIYGLRLSILFALGLTLASSLLGICAGAVQGYYGGWIDLFGQRFIEVWSGLPMLYLLIILASLVQPGV GWLLAIMLLFSWTSLVDVVRAEFLRGRHLEYVKAARTLGLGDAGVMFRHILPNAMVATLTFLPFLLCGAVTTLTALDFLGFGLPPGSPSLGELVGQGRDN LQAPWLGLTVFVVLATLLSLLVFIGEAVRDAFDPRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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