Strain | Pseudomonas aeruginosa strain AZPAE14963 AZPAE14693_contig_31_Average_coverage:_112.41, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGTCAAGGTCGCCATGCGCGCCCAGGACAAGCCGCGGCTGACCACGTTGCGCCTGGCCCTCGCGGACATCAAGCGCGTCGAAGTCGACGAACGCATCGAG GTGGATGACGCCCGAGCCCTGCTGATCCTCGACCGGATGATCAAGCAGCGCCGCGACGCCCAGCGCCAGTTCAGCGACGCCGGCCGCCAGGACCTCGCCG AGGTCGAGGCTGCCGAGATCCTCGTGCTCCAGGACTTCATGCCCAAGCCCCTGGACGACCATGAGATCGACGCCCTGATCGAGCGCAGCATCGTCGACAG CGGCGCCCAGGGTCCGCAGGACATGGGCAAGGCGATGAACCTGCTGCGACCGCAGGTCCAGGGTCGCGTCGACATGGCACAGGTCAGCCAGCGCCTGAAG GCGCGCCTCTCCTCCTGAAACACCGCGCCGGCCTGATCGGCCCGGCGAGAATTGCTATGCTGCCGCTCTGCGCCCACGCGCCGTCGTTTTCGAGAACACC
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DNA Sequence for Gene |
>NS79_RS26670
ATGGCCGGCCTGATTCCGCAAAGCTTCATCGATGACCTGCTGAACCGCACCGACATCGTCGAGGTGGTGAGTTCGCGCATCCAGCTGAAGAAAACCGGCA AGAACTACAGCGCCTGCTGCCCGTTCCACAAGGAAAAGACTCCCTCGTTCACCGTCAGCCCGGACAAGCAGTTCTACTACTGCTTCGGCTGCGGCGCCGG CGGCAACGCGCTCGGCTTCGTCATGGACCACGACCAGCTGGAGTTCCCCCAGGCGGTCGAGGAACTGGCCAAGCGCGCCGGCATGGACGTGCCGCGCGAG GAACGCGGCGGACGCGGGCACACGCCGCGCCAGCCGACCGACTCACCGCTCTACCCGCTGCTCAGCGCCGCCGCCGAGTTCTACAAGCAGGCGCTGAAAA GCCACCCGGCGCGCAAGGCCGCGGTGAACTACCTGAAGGGCCGCGGCCTGACCGGCGAGATCGCCCGCGACTTCGGCCTCGGTTTCGCCCCGCCCGGTTG GGACAACCTGCTCAAGCACCTGGGTGGCGACAACCTGCAACTCAAGGCCATGCTCGACGCCGGCCTGCTGGTGGAGAACAGCGACACCGGCAAGCGCTAC GACCGCTTCCGCGATCGCGTGATGTTCCCGATCCGCGACAGCCGCGGGCGGATCATCGCCTTCGGCGGCCGGGTGCTCGGCGACGACAAGCCGAAGTACC TGAACTCCCCGGAGACTCCGGTCTTCCACAAGGGCCAGGAACTCTACGGACTCTACGAGGCCCGGCAGAAGAATCGCGACCTCGACGAGATCATGGTGGT CGAGGGCTACATGGATGTCATCGCCCTGGCCCAGCAAGGCATCCGCAACGCGGTGGCGACCCTCGGCACGGCGACCAGCGAAGAACACATCAAGCGCCTG TTCCGCCTGGTACCGAGCATCCTGTTCTGTTTCGACGGCGACCAGGCCGGGCGCAAGGCGGCCTGGCGCGCCCTGGAGTCGGTGCTGCCGAACCTGCAGG ACGGCAAGCGCGTGCGCTTCCTGTTCCTCCCCGAGGGCGAGGACCCGGACAGCCTGGTACGCGCCGAGGGCGAGGATGCCTTCCGCGCACGCATCACCCA GCAGGCCCAGCCGCTGGCGGAGTACTTCTTCCAGCAACTGATGCTGGAGGCCGACCCCGCCACCCTGGAAGGCAAGGCCCACCTGGCGACCCTCGCCGCG CCGCTGCTGGAGAAGATTCCCGGGAACAACCTGCGCCTGCTGATGCGGCAACGTCTGTCGGAAATCACCGGCCTGTCCGGCGAAAACATCGGACAACTGG CGCACCACAGCCCGCCACCGTCGTCCATGGATCACGGAGCGAGCGGCGCCTTGGACGGCGACGACTATTTCGCCGCCAGCGCCTACTACGAGAACGAGCC CTCCCATGCGCCGTTCGACGCTGCGCCAGGCTATGGCGAGGCGCAACCGCGCAAGAGCTGGAACAAGGACAAGAAGCCCTGGGACGGCAAGAAGTGGGAT GGCAAGAAGAAGTGGGACAAAGGCGGCCGCGGCGACTTCAAGACGCCGCAACGAACGCCGGTCAGCGTGGAGTCCACCACCCTCAACGCCCTGCGCACCT TGCTGCATCATCCGCAGTTGGCCTTGAAGGTCGACGATGCGGGCACCCTCGCCAGGGAGCAGGATACCTACGCCCAGTTGCTGGTGTCCCTGCTGGAAGC CCTGCAGAAGAACCCGCGGCAGAGCTCGATGCAACTCATCGCGCGCTGGCACGGCACGCCCCAGGGCCGCCTGCTGCAGGCCCTGGGCGAGAAGGAGTGG CTGATCGTCCAGGAGAACCTTGAAAAGCAGTTCTTCGACACCATTACTAAACTCTCCGAGAGCCAGCGTTTCGGCGAGCGGGAGGAGCGTTTACGCAGCG TCATGCAGAAGAGCTACAGTGAACTGACCGATGAAGAGAAAGCCTTGCTCAGAGAGCACTACAGTGTTGCCGCTTCATCGCCTTCCCAGAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACTGGCGCCTCAGCCCAGGCATCAGGTATAATCCTCTGCTTATTTTTTGCCCGCCAAGACCTTCAGTGGATAGGGTGTTATGTCCGGAAAAGCGCAACAG CAATCTCGTCTGAAAGAGTTGATCGCCCGAGGCCGTGAGCAGGGATACCTGACTTACGCGGAGGTCAACGACCACCTGCCGGAGGATATTTCCGATCCGG AACAGGTGGAAGACATCATCCGCATGATCAACGACATGGGGATCAACGTATTCGAGACAGCCCCGGATGCGGATGCCCTGTTGCTGGCCGAGGCGGATAC CGACGAAGCCGCAGCGGAAGAAGCCGCAGCGGCCCTGGCCGCGGTGGAAAGCGACATCGGTCGCACCACCGACCCGGTGCGCATGTACATGCGTGAAATG GGTACCGTGGAACTGCTGACCCGCGAAGGCGAGATCGAAATCGCCAAGCGCATCGAGGAAGGCATCCGCGAAGTGATGAGCGCCATCGCCCAGTTCCCGG
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Amino Acid Sequence |
>DNA primase
MAGLIPQSFIDDLLNRTDIVEVVSSRIQLKKTGKNYSACCPFHKEKTPSFTVSPDKQFYYCFGCGAGGNALGFVMDHDQLEFPQAVEELAKRAGMDVPRE ERGGRGHTPRQPTDSPLYPLLSAAAEFYKQALKSHPARKAAVNYLKGRGLTGEIARDFGLGFAPPGWDNLLKHLGGDNLQLKAMLDAGLLVENSDTGKRY DRFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPVFHKGQELYGLYEARQKNRDLDEIMVVEGYMDVIALAQQGIRNAVATLGTATSEEHIKRL FRLVPSILFCFDGDQAGRKAAWRALESVLPNLQDGKRVRFLFLPEGEDPDSLVRAEGEDAFRARITQQAQPLAEYFFQQLMLEADPATLEGKAHLATLAA PLLEKIPGNNLRLLMRQRLSEITGLSGENIGQLAHHSPPPSSMDHGASGALDGDDYFAASAYYENEPSHAPFDAAPGYGEAQPRKSWNKDKKPWDGKKWD GKKKWDKGGRGDFKTPQRTPVSVESTTLNALRTLLHHPQLALKVDDAGTLAREQDTYAQLLVSLLEALQKNPRQSSMQLIARWHGTPQGRLLQALGEKEW LIVQENLEKQFFDTITKLSESQRFGEREERLRSVMQKSYSELTDEEKALLREHYSVAASSPSQS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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