Pseudomonas aeruginosa AZPAE14963, NS79_RS23685

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14963 AZPAE14693_contig_26_Average_coverage:_94.97, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGCTTCTCGCGCAGTTCTTTCTGCGCGGCGCGGAATTCGGCGTTGTACTGCCAGGAGCGTTCGCTGCCGTCCTGGGCCTGGGCAGTGGCGGCGCCGGTC GCCAGCAGGGCGGCCAGCAGCATCGGGATGATCTTCATGGCAAACCTCTCGGGTTGGCTCGTCGCCGGGGCGAGGTATTCGTCCCGTTTGAGCAAAGAGT AAGAGCGGACGGATTACCCGAGGGTGAGTGGAAAATTACGTTTCCGATAACTTCGGCGATGCTCCGTTGCATGGCGGAGCAGTCTGCGCGAAGCGCATTA AGTGCGAGTTAAGATTGCGGAAAAGTAATCCCCGCCTCATGTCTGCGTCATTTCCCCGGTTCCAGAATCAGCCCCACGGTCAATGCCGGTTGCGGCAGGA CTGCGCGGGGGCGCGATCGACCAGAAGTTCACGCACAGCCAGCGTCGCAAGGCATGGCCGCAGAAGAAAAACAGACATGAACCGATCTGGAGCAATCGCC
DNA Sequence for Gene
>NS79_RS23685
ATGCAAGGGGATGGAAAGAAACGACTGTGGACGCTTCCACTGCTGCTGGGCGCTGGAGTGATGGCCTCGGCCGTCGCCGAGGAGAACGCCGAGCGGAGCA AGGAAGGTTTCATCGAGGGCAGCGAGGTCAACCTGCTGCTGCGCAACTTCTACTTCAACCGCGACTTCCGCAAGGGCCAATCGAGCCCGGCGGGCGGCGG CTACACCGAGGAATGGGTGCAGGGCTTCATGGCCAACTTCTCCTCGGGCTTCACCCAGGGCACGCTGGGCGTCGGCATCGACGCCTTCGCCCAGCTCGGC GTGCGCCTGGACAGCGGCGGCGGGCGTTCCGGCGCCGGCGGTAGCGTCGACCTGCTGCCCTATGACGACCAGGGGCGGCCGCAGGACGACTATTCGCGAG CCGGCGGCGCGGTCAAGCTGCGCTGGTACGGCACCGTGCTGCGGGTCGGCGACGTGTTCCCGGAAACCCCGGTGATCCAGTACGGCAACAGCCGGCTGTT CCCCTCCAGCTTCCGCGGCTTCACCCTGGTCAACGACAGCCTGGCGAAGGGCCTGACCCTGCAGGCCGGCAAGCTGAACTCGATGACCCAGCCGAACAGC ACCAGCGGCAGCGACGACTTCTACAGCTTCTACACCGGCCGGCGCATCGACTCGCCGTGGGTCGCCTACGCCGGCGGCGACTACCAGGCCACCGAGCACT GGAGCGTCAGCCTCTACGGCAGCCGCCAGAAGGACGCCTGGGACCAGTACTACGCCGGCACCAGCTTCAACTATCCGCTGGACGACAAGCTGTCCCTGCT CGGCGGCGCCAACTACTACAAGGTCAAGGACCAGGGCAGGCAGGTGATGGGCGAACTCGACAACGACATCTGGAGCGTGCGCGGCGGCTTCGCCTACGGC CCGCACCAGGTGCTGCTGTCGTACCAGCGCAACAACGGCGACGACGACTTCGACTACCTGCGCCAGACCGACTCCATCTACCTGGACAACTCGATCCAGT ACAGCGACTTCAACTCGCCCAAGGAACGCTCGCTGATGCTCCGCTACGACCTCGACATGGCCGCCTTCGGCGTGCCGGGGCTGAGCTTCATGACCCGCTA TGGCAAGGGCTGGGACGCCGATTATTCGAATGCCAACAGCGTCTACATGCGCACCGACGCCAACGGCAACCCGCTGACCAACCAGGGCCGCTGGGAACGC GACGTGGAGGTCAAGTACGTGGTGCAGGGCGGCGCGGCCAAGGACCTGGCGTTCCGCGTGCGCCAGGCCACGGTGCGCTCCGACAGCTTCGAGTCGGACC TCGACGAAGTCCGCCTGATCGTCGAGTACCCGCTGCAAATCCTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGGCGCGCCGCCGCCCCATCCGGGGCGGCGCTCTGCGACAGCCCGTTGCTGGCGGCTGCGCGGCGGCGCTGCTACTTTCCTCTGGGTAGGCGGGCCGAAG GGCGGTTCCTGGCCGGGCATGGCTTCGACCTGCCGGTGGGCGCCGCGACCCGAACCTCGGCCACGCCATTCCACCCATGCCGCCCGGGCACCGGCGTGCC CGTGGCAGCCCAGGCTACGGGCGCCGCGTAGCCAGCCAAGCGGGAGTCGACATGGCCTCGTGGACCTTGGTGGACGCCAGCGCGATCGCTGTCCGCCATC CCTACACCTTCTACAAACCGGACGCGGAGACCATCGACCGGGTCGCCGCCGGGGAAAGCGTCAAGCTGATCTTCGCCTTCGATACCGACAACCCCGATGC GCCGCGCGCCGAGCGGCTCTGGGTGACGGTCGAGGGCATCGAGGCGGATGGCGCCTTCAGCGGCCGCCTGGACAACTATCCGCAATACATCCGCGACCTG
Amino Acid Sequence
>porin
MQGDGKKRLWTLPLLLGAGVMASAVAEENAERSKEGFIEGSEVNLLLRNFYFNRDFRKGQSSPAGGGYTEEWVQGFMANFSSGFTQGTLGVGIDAFAQLG VRLDSGGGRSGAGGSVDLLPYDDQGRPQDDYSRAGGAVKLRWYGTVLRVGDVFPETPVIQYGNSRLFPSSFRGFTLVNDSLAKGLTLQAGKLNSMTQPNS TSGSDDFYSFYTGRRIDSPWVAYAGGDYQATEHWSVSLYGSRQKDAWDQYYAGTSFNYPLDDKLSLLGGANYYKVKDQGRQVMGELDNDIWSVRGGFAYG PHQVLLSYQRNNGDDDFDYLRQTDSIYLDNSIQYSDFNSPKERSLMLRYDLDMAAFGVPGLSFMTRYGKGWDADYSNANSVYMRTDANGNPLTNQGRWER DVEVKYVVQGGAAKDLAFRVRQATVRSDSFESDLDEVRLIVEYPLQIL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site