Pseudomonas denitrificans ATCC 13867, H681_12820
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas denitrificans ATCC 13867, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCATCATCGACCCGCCGAGCTTCCAGAAAGGCAGCTTCGTCCTCGACAAGGACTACGCCCGCGTCCTGCGTCGCCTGCCGGAACTACTGGACGGCGCCGG CAGCGTGCTGGCCTGCGTGAACGACCCGGCCGTCGGCATGGACTTCCTCCTCCAGGGCATGGCCGCCGAGGCGCCGCAGCTGCGCTTCGTCGAGCGCCTG GAAAACCCGCCGGAATTCGCCGATATCGAAGAAGACAGCGGGTTGAAGGCGCTGGTGTTCCGGCTGGACTGACCCGTACCGCCCCATCGCCGGCACTATG CCCCTGTAGGAGCGAGCTTGCTCGCGAACCCCGCTTCACGCCGGGCCATGCGGTGCAATGCGGTTCGCGAGCAAGCTCGCTCCTACGAAGAGCAGCCCGC AGCCATGTAGGCAATCTCCCGATGAAAGGCCGTGCCAACCCTTGCGGCCAGGCCCCCATCACGCCATCCTTGCCACTGTATGTAAAACCAGTGCCTGCCG
|
|
| DNA Sequence for Gene |
>H681_12820
ATGTCCGTGCCGCTCGACCCCAGCCTCTACTACCTGACCAACTTCCACCGCGCCCTCGACTGGATCGACGAACGCTACGCCGACCTGCTCGACGCCGAGG AAGCCCGGTTCATCGCCGATTTCCGCGCGCTGCCGTTGCCGTCACGGGCGTTGCTGGTGCGGCTGGTGATGCGCAAGGGGCCACACTTTCGCGCCGGCAA GCTGAGCTACGCGGAGATCGGCGACATCCCCAGCGCTGCCGCGCCGCTGCTGGAGCTGGGCTGGCTCGATAACGCTTACCCGCTCACGCTGGAAGAGCTG CTGTCACTGCTGCTCAAGGACGAACTGCTCGCGCGTTTTCGCGATGACCTGCCGCGCGGCGCGCTGAAGAAGGCCGAACTCTACGAGCACCTGCACGCCT ACCACGAGCAGGTGCAGCCCTTCGCCGGCTGGTACCCGGAGCTCGACCAGCTCTACACGCTGATGGTGACGCCGCTATGCGACCGCCTGCGCCTGCTGTT CTTCGGCAACCTGCAGCAGGACTGGTCCGAATTCGTCCTCGCCGACCTCGGCATCTTCCGCTACGAGACCGTGTCCTTCACCGCCGATTCCCGCGCCTTC CGCCGCCGCAATGACCTTGAGGCCTACATCCACCTGTGGAACGGCGCGGTGCGCTTCGAAACCGGCGAACCCATCGCCGAGCTGCTGGCCGAACTGGGTG ACTTCCACAGCGACAACAGCTACCTGCAAGCCCGCCACGACCGCCTGCTGTACCGCATGGCCTACCAGCTGGAGCGCGAAGGCGAGCTGGACGCCGCGCT GGCGCTTTACCAACGCACCGCCGCCGGGGGCTCGCGGCAACGGCAGATTCGCGTGCTGGAACGCCTGCAACGCTTCGAGGAAGCCCATGCGCTGGTGCAA GCCGCCCTGGCCGCGCCGGAAAGCGACGGCGAGCTGCAGTTGGTCGAGCGCGCGCTGACCCGGCTGGTCCGCCAGCTCGGGCTGCCGAAGGAAAAAGCCG CCAAGGCTGCGCCGCCGCTGCGCATCGACCTGGAGATGCAGCGCCCGGACGTCAACGTCGAATTCGCCGTGCAGGCCGTGCTTCACGAGGACGAAGCGCC GGTGCACTACGTGGAGAACGCGCTGATCTGCAGCCTGTTCGGCCTGCTCTGCTGGGAAGTGATCTTCGCCCCGCTGCCCGGCGCCTTTTTCCACCCCTTC CAGGTCGGGCCCAGCGATCTCAACCGCAGCGACTTCGTCAGCCGCCGCGCGGAAGCCTTCGCCGCACGCCTGGCGTTGCTGGACAGCGATGCGTACCTGA CGGCGATCCGCGAAACCTGGGCCGCCAAGACCGGCATCCTCTCGCCCTTCGTACACTGGGAGCTGCTCGACGAAAACCTGCTGGAGCAGGCCCTGCACTG CCTGCCGGCGGCCCACCTGAAGCTGTGGTTCGAACGTCTGCTGGCCGACCCGAAGACCAACCGCGCCGGCATGCCCGACCTGATCCAGTTCTGGCCTGGC GAGGCGCGCTACCGGATGATCGAGGTAAAAGGCCCCGGCGACCGCCTGCAGGATAATCAGAAGCGCTGGCTGGCCTTCTGCGCCGAGCACGGCATGCCGG TGGAAGTCTGCTACGTACGCTGGCAGGGCGAGGCGGACGGGCCCGCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCTACGCCATCGCCGTGCGCGCGCTGTGCGAATTCACCGCCAAGGAAGGTGACCTCGACCTGCGCTTCACCCCCGCTCCCACGGCTCAGGAAGGCATGGC CGGGCACGCCACGGTGGTCTCCCGCCGCGGGCTGGGCTACATCGCCGAACTGCCGTTGCGCGGCGAATACCCGGGGTTGGTGGTCAGCGGCCGCGCCGAC GGCTACGACCCGAACGAAAACCTGCTGGAAGAGATCAAGACCCATCGCGGCGACGTCGCACGCATCCCGCAGAACCACCGGCTGCTGCACTGGGCGCAGG TGAAGGTATATGGCTGGCTGCTCTGCCAGACCCTGGAGATCGACGCCATCGACCTGGCCGTCGTCTACTTCAACGTCATCACCCAGAAGGAGACCGAGTT CCGCGAGCGCTTCGCCGCCGAGGACCTGCGCGCCTTCTTCGAGCTGCAATGCCAGCGCTTCGTGCAATGGGCCGAGCAGGAAAGCGCCCACCGCGTCGAG
|
|
| Amino Acid Sequence |
>hypothetical protein
MSVPLDPSLYYLTNFHRALDWIDERYADLLDAEEARFIADFRALPLPSRALLVRLVMRKGPHFRAGKLSYAEIGDIPSAAAPLLELGWLDNAYPLTLEEL LSLLLKDELLARFRDDLPRGALKKAELYEHLHAYHEQVQPFAGWYPELDQLYTLMVTPLCDRLRLLFFGNLQQDWSEFVLADLGIFRYETVSFTADSRAF RRRNDLEAYIHLWNGAVRFETGEPIAELLAELGDFHSDNSYLQARHDRLLYRMAYQLEREGELDAALALYQRTAAGGSRQRQIRVLERLQRFEEAHALVQ AALAAPESDGELQLVERALTRLVRQLGLPKEKAAKAAPPLRIDLEMQRPDVNVEFAVQAVLHEDEAPVHYVENALICSLFGLLCWEVIFAPLPGAFFHPF QVGPSDLNRSDFVSRRAEAFAARLALLDSDAYLTAIRETWAAKTGILSPFVHWELLDENLLEQALHCLPAAHLKLWFERLLADPKTNRAGMPDLIQFWPG EARYRMIEVKGPGDRLQDNQKRWLAFCAEHGMPVEVCYVRWQGEADGPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|