Strain | Pseudomonas aeruginosa strain AZPAE14963 AZPAE14693_contig_20_Average_coverage:_95.75, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATTCGCGTCGGCGCCAGCTCCAGCACCGCCAGGCGGCTGCCCGGCGCCTGGCGGCGAAGACTGGCGAGGATCGGCAGGAGGATCGCCGACTCGGCGTAGT CGGTGGCGGCGACGCGCCAGGTATGCCGTGACTGCGTCGGATCGAACGGCGCGGCCGGCGCCACCGCCTGCTCCAGGGCTTCCAGGGCCAGGCGTAACGG CTCGCGCAGCTCCTCCGCCCGCGCCGTCGGGCGCATCCCGCGCGGGCCGGGAAGCAGCAAGGGATCGTCGAAGATCGCCCGCAGCTTGGCCAGGTGCACG CTCACCGAGGGTTGGGAAAAATTCAGGCGTTCCGCCGCGCGCGTCACATTGTGTTCGGTGAGCAGCACGTCGAGGGTCACCAGCAGGTTCAGGTCCAGTC GACGGAGATTAATCATCCATATACCTGGAATTTCGGATATTCATTTCAACTATATCCGGCGATGGCCGATCCTGCGCCCACCTTTTGCCGGAGACCCGCC
|
|
DNA Sequence for Gene |
>NS79_RS19185
ATGAACGTACTCATCGTCTATGCCCATCCCGAGCCGCGCTCCCTCAACGGTGCGCTCAAGGACTTCGCGGTCGCCCGCCTCGAGGCGGCCGGCCATGCGG TGCAGGTTTCGGACCTCTACGCGATGGGCTGGAAGGCCGTGCTCGATGCCGGCGACAGCCTCGAGCGCGAGGCCAGCGAACGCTTCGATCCTTCCGCAAC TTCCCTGCGCGCCTTCGAGAACGGTTGGCAGAGCGTCGACATTGCCGGTGAGCAGGACAAGCTGCGCTGGGCCGATACGCTGATCCTGCAATTCCCGCTC TGGTGGTTCAGCATGCCGGCGATCCTCAAGGGTTGGATCGATCGCGTCTATGCCTGCGGCTTCGCCTACGGGGTCGGCGAACATTCCGACAGCCACTGGG GCGACCGCTACGGCGAGGGCCGGATGCAGGGCAAGCGGGCGATGCTGGTAGTCACCGCCGGCGGCTGGGAGTCGCACTACGCCGCGCGCGGTATCAACGG ACCGATGGACGACCTGCTGTTCCCCATCCACCACGGCATCCTGCATTACCCCGGCTTCGAGGTATTGCCGCCGTTCGTCGTCTATCGCAGCGGCCGGATC GATGCGGAGCGTTTCGCCGCGCTGAGCGAGCAGTTGGGCCGGCGCCTCGATGACCTGCAGCGCACTGCGCCGATCCCGTTCCGCCGGCAGAACGGCGGCG ACTACCTGATCCCGGCGCTGACCCTGCGCGACGAACTTGCCCCGCAGCGGGCCGGTTTCGCCATGCACCTGGCCGAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CCTGGGGTCAGGCCTCCAGCGGCTGCGCCTGGGCGGCCCCCTGCGCGCCGCGTGCGGCGAAGAGCTGGCTGCCGATGTGCAGGGCCTGGTCCAGATGCCG GATCGGATCGGCGCTCTCCGACTCCAGCAACAGTTCGGAACGGACCACCCGTGCGCCGCAGTAATCGAAGATGCCATGGTCGATCTGGGTGCGCATCGCC CCGGCGTAGCCGTGCCGCTCGAAGGTGCCGGCATCGGCGCCGCCGACACCGACCAGCACCACGCGCAGGCGCTGCAGCTTTTTCCGCAGGTCGCCGCCGA TGCTGTAGTCGAAGGCCCAGCCATTGGAGAACACGCGATCGATCCAGCCCTTGAGCAGGGCCGGCATCGACCACCAGTAGATCGGGTAGACCAGCACCAG GGTATCGGCGCGATCGATGCGCGCCTGCTCGGTGAGGACGTCGGCGGGAGGCGACGCCTGGCCTCGATGCACGGCGTGGTCGGCCAGGCCGAAGCGCGGC
|
|
Amino Acid Sequence |
>NAD(P)H dehydrogenase
MNVLIVYAHPEPRSLNGALKDFAVARLEAAGHAVQVSDLYAMGWKAVLDAGDSLEREASERFDPSATSLRAFENGWQSVDIAGEQDKLRWADTLILQFPL WWFSMPAILKGWIDRVYACGFAYGVGEHSDSHWGDRYGEGRMQGKRAMLVVTAGGWESHYAARGINGPMDDLLFPIHHGILHYPGFEVLPPFVVYRSGRI DAERFAALSEQLGRRLDDLQRTAPIPFRRQNGGDYLIPALTLRDELAPQRAGFAMHLAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|