Pseudomonas aeruginosa AZPAE14963, NS79_RS17425
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14963 AZPAE14693_contig_20_Average_coverage:_95.75, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACCTCGATCTCAACAGCGGCAGCAACGCAGCCGAACAGATTCTCGGTCACGCCCGTTACGCACTGCTCCTGCAAACGCGCCTGGCAGGCCTGGCGCCGC CGCTGGACGGCGTCTATCCGGCGATCCAGAACCGTGCCGGACTGGTCGAGGCAGTGCGCTTCGCTCGCGACATGGGCTTCGGCGGGTTGCTGTGCATCCA TCCGAGCCAGGTCGAGCCGATCCACCAGACATTGATGCCGAGTCCCGCGGAACTGGAGTGGGCGCGTCGGGTGGCAGAGGCCGGCGCCTCCGGTGCCGGC GTCTTCGTGGTCGACGGCGAGATGGTCGACGCGCCGGTGCTGGGGCGCGCGCGACGCCTGCTGGAGCGGGCCGGGGAGGGTGGCTGAACGCGTTCGACAG ACGCGAACGCGGGCTTGAGCAATGGCGAATTCTCCGAACGCGCCGGCTGCGTCAGGCTCGTCGATACCTCGAAAGCACAACAACAATCTGAGGTCACGAA
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| DNA Sequence for Gene |
>NS79_RS17425
ATGTTCAAGACGATGGTACGGGCGCTGTTGTGCGCCCTGGCGATCGGTGGCTCCTGCCTGGCGAATGCCGCGCAGCCGATCGTCATCAAGTTCTCCCACG TGGTCGCGGAAAACACGCCCAAAGGCCAGGGCGCGCTGCTGTTCAAGAAACTCGTCGAACAGCGCCTGGGCGGCCGGGTCGAGGTAGACGTCTATCCCAA CTCGTCGCTGTTCGGCGACGGCAAGGAAATGGAGGCGCTGCTGCTGGGCGACGTGCAGATGCTGGCGCCGTCCCTGGCCAAGTTCGAGCAGTACACGCGC AAGGTGCAGATCTTCGACCTGCCGTTCCTCTTCGACGACATCCAGGCGGTCGACCGCTTCCAGCGCAGCCCGCAGGGGCGCGCCTTGCTGACCAGCATGC AGGGCAAGGGCATCCTCGGCCTGGCCTACTGGCACAACGGGATGAAGCAGCTCTCCGCCAATCGCCCGTTGCTGGAGCCGGAAGACGCGCGCGGGCTGAA ATTCCGCGTGCAGGCGTCCGACGTGCTCAACGAGCAGTTCCGCCAGCTCCGCGCGATCTCCCGGAAGATGTCCTTCGCCGAGGTCTACCAGGGCTTGCAG ACCGGCGTGGTGAATGGCACCGAGAACACCTGGTCGAACTACGAGAGCCAGAAGGTCAACGAGGTACAGAAGTATTTCACCGAGTCCAACCACGGCCTGG TGGACTACATGGTGATCACCAACGCGAAGTTCTGGAATGGCCTTCCGGCGGACATCCGCGAAGAACTGCAGCGGATCATGGACGAGGTCACCGTGCAGGT GAACCTCGAGGCCGAGCGCCTCAACCGCGACGCCCGCCAGCGCATCCTCGCCAGTGGCGCCAGCGAGATCCATACCCTGAGCCCGCAGCAGCGCGCCGAC TGGCGCCAGGCGATGCAGCCGGTATGGCAGAAATTCCGCGGCAATGTCGGTGCCGATCTGCTCCAGGCCGCCGAAGCTTCCAACCGTCCCGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCGTCCGGCCCCGCCCGGCCGGGCGGGGCATTGTGGAGAACGCTGCGATGAATCGACTCGTGCGCGTCTGGAACCGCTTCGAGGAGGGCGCTATCGCCT TCCTGCTGGCGGCGATGACGCTGGTGACCTTCCTCTATGTGGTGATGACCAACGTCTTCACCCTGTTCTACGACCTCGGCGACCGCCTGCCGACACTGCG GGCTCCGCTGTACTCGATGGGCGACGCGATCCTCGGGGTAGCCCAGGATATGTCCTGGAGCAACGCGCTGACCAAGGCGCTGTTCGGCTGGCTGATCTTC CTCGGCATCGCCTACGGCGTACGCACCGCCGGCCACCTCGGGGTGGATGCCCTGGTGCGCCTGGCGCCGCGTCCCTTGCAGCGCCTGATCGGGATACTCG CCTGCCTCTGCTGCCTGGGCTACGCCGGGCTGTTCATGGTCGCCAGCTACGACTGGGTGAAGACCCTGTTCGTCGCCGGCATCGGCGCCGAGGACCTCGA
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| Amino Acid Sequence |
>C4-dicarboxylate ABC transporter
MFKTMVRALLCALAIGGSCLANAAQPIVIKFSHVVAENTPKGQGALLFKKLVEQRLGGRVEVDVYPNSSLFGDGKEMEALLLGDVQMLAPSLAKFEQYTR KVQIFDLPFLFDDIQAVDRFQRSPQGRALLTSMQGKGILGLAYWHNGMKQLSANRPLLEPEDARGLKFRVQASDVLNEQFRQLRAISRKMSFAEVYQGLQ TGVVNGTENTWSNYESQKVNEVQKYFTESNHGLVDYMVITNAKFWNGLPADIREELQRIMDEVTVQVNLEAERLNRDARQRILASGASEIHTLSPQQRAD WRQAMQPVWQKFRGNVGADLLQAAEASNRPD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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