Pseudomonas aeruginosa AZPAE14963, NS79_RS15740 (fadH)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14963 AZPAE14693_contig_18_Average_coverage:_105.25, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGACGCTCTTGAAGCCGAACAGACCGTGGGACAGCACGATGGGATAGCGCGTGCGGGTGTAGTCGGTCGCAGCGTGCACGGGAAGGCTGGCGGCCAGC GCTACCAGCGCCGCCGCGAGGAACGTCTTGTTCTTGTTCATCGTCGAGACTCCGTTCGGATTGGACAGGCAGTTGGCAAGGCACGTGCTGAGCGGGCCGG AACCCCAGCCTGACAGCGCCGCCAAAGGCGTCGAGCCGTGCTTAAGTTGGGCTCCCGGCGCACGCCATTACCCCGGGTAACAGCGCCGCCGTTCCCATTC CGCCCGCCGCGCCGCAAGTGCTGTCGGAGAGCTTTCGATGCCTGTCACCCGGGGCCACAGCGGTGCAGCGCAGCGAGCACCTATCCGATCAGCCAGTCCG CCGGCTTGACCGAAATGCCTGGCGGTTCCGGCAAGCGGGCCGCATTCGGCGGCGGCGCAACTTCCTATGGTGAAGCGTCCCTGGCTACCGGAACCGCGCC
|
|
| DNA Sequence for Gene |
>NS79_RS15740
|fadH
ATGCGCAACCCCTACCCGCCGCTCGCCGCCGCTCCCTATCCGCACCTGCTGGCCCCGCTGGACCTGGGCTTCACCCGTCTGCGCAACCGCGTGGTGATGG GTTCGATGCACACCGGGCTGGAGGATCGTCTGTGGGACTTCGGCAAGCTCGCTGCCTACTACCGCGAGCGTGCCCGGGGCGGCGTCGGGCTGATCGTCAC CGGCGGCTTCGCGCCCTGCCGCGAAGGTTGGCTGCTGCCCTTCGGCAGCAGCCTCACCAGCGCCCTGGAGGTGCCCGCCCATCGTCGCCTGACCCAGGCG GTGCATGCCGAGGGCGGCAAGATCCTGCTGCAGATCCTCCACGCCGGGCGCTATGGCTACCACCCGATGGCGGTGTCCGCCTCGCCGTTGAAGTCGCCGA TCAGTTGGTTCACCCCGCGCGAGCTCTCCGAGCGCGGCATCCGCAAGACCATCCGCGCCTTCGTCCGTTGCGCGCGGCTGGCCAAGGCCGCCGCCTACGA CGGCGTGGAGGTGATGGGCAGCGAAGGCTACCTGCTCAACCAGTTCCTCTGCCCGCGCACCAATCGCCGCGACGACCAGTGGGGCGGCCCGCTGGAAAAC CGCATGCGCCTGGCGCTGGAGATCGTCCGCGGCATCCGGCGGATCGTCGGCCAACGCTTCATCCTCTGCTATCGCCTGTCGCTGCTCGACCTGGTCGAGG GCGGCAATACCTGGGACGAAGTACGGCGCATCGCCCTGGCCCTGGAGGAAGCCGGAATCACCCTGCTCAACACCGGCATCGGCTGGCACGAGTCGCGCGT GCCGACCATCGTCACCTCGGTGCCGCGCGCGGCCTTCGCCGAGGTCAGCGCACGGCTGCGCCACGAGCTGAAGGTGCCGGTGATCGCCAGTAACCGGATC AACACCCCCGAGGTCGCCGAATCCCTGCTCGCCACCGGCAAGGCCGACCTGGTGTCGATGGCCCGGCCGCTGCTGGCCGACCCGCAGTTCGTGGCCAAGG CCGGCGCCGGCCGGGCCGAGGAGATCAACACCTGCATCGCCTGCAACCAGGCCTGCCTCGATCATGCCTTCGCCAACCGCCGCGCCACCTGCCTGGTCAA CCCGCGGGCGGCCTTCGAGACCGAATTGCGCTACCGCAAGGCGCGCACGCAGAAGCGCATCGCGGTGATCGGCGCCGGCCCCGCCGGGCTCTCCGCCGCC TGCGTGGCCGCCGAGCGCGGGCATCGGGTCAGCCTGTTCGAGGCGAGCGGGGAAATCGGCGGGCAGTTCAACCTGGCCAAGCGGATTCCCGGCAAGGAGG AGTTCCGCGAAACCCTGCGCTACTTCCGCGTGCGTCTGGAACGCCTCGGCGTCGACCTGCGCCTCGGCCACCGGGTGCGCCAGGGCGAGCTGGACGGTCA GTTCGACGACGTGGTGGTGGCCACCGGCATCCAGCCACGCCGGCCAAGGATCGACGGCATCGGCGGACCGACCGTACTCAGCTACGTGGACGTGCTGCGC GGCGCGCCGGTGGGCGCGCGGGTCGCCATCGTCGGCGCCGGCGGCATCGGCTTCGACGTCGCCGCCTTCCTCGTCGCCGCGCCCAGCGACGGCCAGCCGC GGGCGCTCGGCGAATGGCTCGCGGAATGGGGCGTGGACCTCGACAACAGCCAGCCCGGCGGCCTCCGCGAACCCGCTCCGACGCGGCCAGCGCACCAGGT CTGGCTGCTCCAGCGCAAGCCCGGCGCTCCCGGCGCGCAGCTCGGCAAGACCAGCGGCTGGGTACACCGCGCGCACCTCAGGCACAACGCCGTACGCATG CTCGGCGGGGTGGAGTACCTGAAGATCGACGAACGCGGCCTGTTGATCCGCGTCGACGGCGAGGAACGCTGGCTGGAGGTGGACAACGTGGTGATCTGCG CCGGCCAGGAGCCGCTGCGCGAGTTGCAGATCAGCCAGGCGGCGGAAAGCCTGCGCTTCCACCTGATCGGTGGGGCGCGGGTGGCAGGGGAACTGGATGC CAAGCGGGCGATTCGCGAGGGGGCCATGCTGGCGGCGCGCTTGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGGGATAACGCCGCTGGCGGTATGGCTGCCGTAGAGCGAACAACCGCTCGCGGTTACCCGCCGGGCGGAATCCGAGGGCGTGCGATGGGGTCTCGCGTTT TCCCCCTCCGCCCCCGCCTGGTGCATACTGTGCGACTCCCCGTACCACTCCGGCCCGTCCCTCGCCATGCGCGGGGCGCGCTCGCCGTCATCGTTCCAGG AGTCTTGCATGCCCACTCCACCCTGGTGGCTGTTCGTCCTGCCCCTGCTCGCCGGCGCCTGCCTACCGCTGCAGGCAGGGATCAACGGCCAGTTGGCCAA GCAGGTGTCCAGCGTCCTCGCCGCGGCACTGATCTCGTTCTTCGTCGGCACCCTCGGGTTGCTCGCCCTGACTCTCTCGCAGCGCGAGTTTCCCGGCCTG GCGGCATTGCGCGGGCTGAGCTGGTGGCACTGGTGCGGCGGTTTCCTCGGCATGTTCTTCATCTTCATCGCCGCCTTCGCCGCACCGCGCATCGGCGCGC
|
|
| Amino Acid Sequence |
>2,4-dienoyl-CoA reductase
MRNPYPPLAAAPYPHLLAPLDLGFTRLRNRVVMGSMHTGLEDRLWDFGKLAAYYRERARGGVGLIVTGGFAPCREGWLLPFGSSLTSALEVPAHRRLTQA VHAEGGKILLQILHAGRYGYHPMAVSASPLKSPISWFTPRELSERGIRKTIRAFVRCARLAKAAAYDGVEVMGSEGYLLNQFLCPRTNRRDDQWGGPLEN RMRLALEIVRGIRRIVGQRFILCYRLSLLDLVEGGNTWDEVRRIALALEEAGITLLNTGIGWHESRVPTIVTSVPRAAFAEVSARLRHELKVPVIASNRI NTPEVAESLLATGKADLVSMARPLLADPQFVAKAGAGRAEEINTCIACNQACLDHAFANRRATCLVNPRAAFETELRYRKARTQKRIAVIGAGPAGLSAA CVAAERGHRVSLFEASGEIGGQFNLAKRIPGKEEFRETLRYFRVRLERLGVDLRLGHRVRQGELDGQFDDVVVATGIQPRRPRIDGIGGPTVLSYVDVLR GAPVGARVAIVGAGGIGFDVAAFLVAAPSDGQPRALGEWLAEWGVDLDNSQPGGLREPAPTRPAHQVWLLQRKPGAPGAQLGKTSGWVHRAHLRHNAVRM LGGVEYLKIDERGLLIRVDGEERWLEVDNVVICAGQEPLRELQISQAAESLRFHLIGGARVAGELDAKRAIREGAMLAARL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|