Pseudomonas aeruginosa AZPAE14963, NS79_RS13950

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14963 AZPAE14693_contig_17_Average_coverage:_107.51, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCGGTTGGCCTGCTGGAAGAGATCGAGGCCTGGCCGCAGGGCTGGGACAGCGACGTCGGCCCCGGCGGCGCACTGCTTTCCGGCGGCCAGCGGCAACGC CTGTGCCTGGCTCGCGGGCTGCTCTCGGCAGCGCCGTTGCTGCTGCTCGACGAGCCCACCGCCAGCCTCGATGCAGCCAGCGAGGCGCAGGTGCTGCGCA GCCTGCTCGGGTTGCGCGGCCGGCGCACCCTGCTGGTAGTGACCCACCGCTCGGCGCTGGCGCGTCAGGCCGACCAGGTACTGCTGCTGGAGAAGGGGCG GCTGCGCCTGAGTGGACGTCACGCCGATCTGCTCGTCCGGGACGACTGGTATGCCGGCTTCGTCGGGCTGGCGGGCGAGGAAAGTTCCGCGACGGCCGTG GATCGATAAAGAAAGACCGGCAATCGAAAAAGCCCCGGAGATGATTTCTTCATAATGATAAGCATTATCAAATCGTATATCCCCCGAGGCTGTTCGAACG
DNA Sequence for Gene
>NS79_RS13950
ATGAAAACGGAGACGAAGGTGATCAAGGGACGCCAGGGCATCGCCCGCAATCGGCACACCCCGTTGTGCCTGGGGCTGCTGCTGGCGCTGAGTCCGCTGG CCGCGGCCGTGGCCGACGCGCGCAAGGACGGCGAGACGGAACTGCCGGACATGGTGATCAGCGGAGAAAGCACGTCTGCCACCCAGCCGCCGGGGGTGAC TACCCTGGGCAAGGTGCCGCTCAAGCCGCGCGAGCTGCCGCAGTCCGCCAGTGTCATCGACCATGAGCGCCTCGAACAGCAGAACCTGTTCAGCCTCGAC GAAGCCATGCAGCAGGCCACCGGGGTCACCGTGCAGCCGTTCCAGCTGCTGACCACCGCCTACTACGTGCGCGGCTTCAAGGTCGACTCCTTCGAGCTGG ACGGGGTGCCGGCACTGCTCGGCAATACCGCCAGTTCGCCGCAGGACATGGCGATCTACGAGCGGGTCGAGATCCTCCGCGGCTCCAACGGACTGCTGCA TGGCACCGGCAACCCGGCGGCCACCGTCAACCTGGTGCGCAAGCGGCCGCAGCGCGAGTTCGCCGCCAGCACCACCCTCAGCGCCGGGCGCTGGGACCGC TACCGCGCCGAGGTCGACGTCGGCGGCCCGCTGAGCGCCAGCGGCAACGTGCGCGGCCGAGCGGTGGCCGCCTACGAGGACCGCGACTACTTCTACGACG TGGCCGACCAGGGCACCCGCCTGCTCTACGGGGTGACCGAGTTCGACCTGAGCCCCGACACCCTGCTCACCGTCGGTGCGCAATACCAGCACATCGACTC GATCACCAACATGGCCGGGGTACCGATGGCCAAGGATGGGTCCAATCTCGGACTGTCCCGCGACACCTACCTCGATGTCGACTGGGACCGCTTCAAGTGG GACACCTACCGCGCCTTCGGCTCCCTCGAACAGCAACTGGGCGGCGGCTGGAAAGGCAAGGTCAGCGCCGAATACCAGGAAGCCGATTCGCGCCTGCGTT ACGCCGGCTCCTTCGGCGCCATCGACCCGCAGACCGGCGACGGTGGCCAGCTGATGGGCGCCGCCTACAAGTTCAAGAGCATCCAGCGCAGCCTCGACGC CAACCTCAATGGGCCGGTGCGACTGTTCGGCCTGACCCACGAACTGCTCGGTGGGGTCACCTACGCCCAGGGCGAGACCCGCCAGGACACCGCACGCTTC CTCAACCTGCCGAACACCCCGGTCAATGTCTACCGCTGGGACCCGCACGGCGTGCCGCGCCCGCAGATCGGCCAGTACACTTCGCCGGGCACCACCACCA CCACCCAGAAAGGCCTCTATGCCCTGGGTCGGATCAAGCTCGCCGAGCCGCTGACCCTGGTGGTCGGCGGCCGCGAAAGCTGGTGGGACCAGGACACCCC GGCCACCCGCTTCAAGCCCGGTCGCCAGTTCACGCCCTACGGCGGGCTGATCTGGGACTTCGCCAGGGACTGGTCGTGGTATGTCAGCTACGCCGAGGTC TACCAGCCGCAGGCGGATCGCCAGACCTGGAACAGCGAGCCGTTGAGCCCGGTGGAAGGCAAGACCTACGAAACCGGGATCAAGGGCGAACTGGCCGACG GCCGCCTGAACCTGTCGCTGGCGGCGTTCCGCATCGACCTGGAGAACAATCCGCAGGAAGACCCGGACCATCCGGGGCCGCCCAACAATCCGTTCTACAT CAGCGGCGGCAAGGTGCGCAGCCAGGGCTTCGAGCTGGAAGGCACCGGCTACCTGACGCCCTACTGGAGTCTCTCGGCCGGCTACACCTACACCAGCACC GAGTACCTCAAGGACAGCCAGAACGACTCGGGGACGCGCTACTCCACCTTCACCCCGAGGCACCTGCTGCGCCTGTGGAGCAACTACGACCTGCCCTGGC AGGATCGGCGCTGGAGCGTCGGCGGTGGACTCCAGGCGCAGAGCGACTACAGCGTCGACTACCGTGGCGTGAGCATGCGCCAGGGCGGCTACGCACTGGT CAACATGCGCCTGGGCTACAAGATCGACGAGCACTGGACGGCGGCGGTCAACGTCAACAACCTGTTCGACCGGACCTACTACCAGAGCCTGTCCAACCCC AACTGGAACAACCGCTACGGCGAACCGCGCAGCTTCAACGTCAGCCTGCGGGGCGCGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCCGCGCCGGCCGGGCTTCGGCTGGGCCTGGCGGGTTCCGCTGGCGCTCGCCGGCAGCCTGGCGGCGGCGGCCGCCAGCGGCTATCTGTTGACTCGCGG GCTGCCCCTGGACGACCCGCTCGAGCGTCTCTACGCCGGGCTCTTCGGCGCGCTCGGGGTGGGCTTGTTGCTGCTTGTCGGCGGGTTGCTGGCGCGTGGT CCGGGCAACCTCGCCTGGCGCCTGGGCGGTAGCCTGCTGGCACTGGGCCTGGCGCTTTGGCTGCTGGCGGGGCGCGGTTGAAGTGGCGGCGCGTCCTCTC CTGCTCTCGCTGCACGGTGGCGCCGGCGCGCTGTTCGGCGTGCTGCTGTTCGTGGTGCTGTTCAGTGGCGCCTGGAGTCTTGGCCACGACGACCTGCGCG AGTGGCTGCGGGCCCCGGCGCAGGCGGGAGGAGAAGCCCTTGCGCTGGAGCGCCTGCTCGAACGGGCGGGCGAGGAAGGCGTCGACATCCGCGATGCGAC
Amino Acid Sequence
>amino acid ABC transporter substrate-binding protein
MKTETKVIKGRQGIARNRHTPLCLGLLLALSPLAAAVADARKDGETELPDMVISGESTSATQPPGVTTLGKVPLKPRELPQSASVIDHERLEQQNLFSLD EAMQQATGVTVQPFQLLTTAYYVRGFKVDSFELDGVPALLGNTASSPQDMAIYERVEILRGSNGLLHGTGNPAATVNLVRKRPQREFAASTTLSAGRWDR YRAEVDVGGPLSASGNVRGRAVAAYEDRDYFYDVADQGTRLLYGVTEFDLSPDTLLTVGAQYQHIDSITNMAGVPMAKDGSNLGLSRDTYLDVDWDRFKW DTYRAFGSLEQQLGGGWKGKVSAEYQEADSRLRYAGSFGAIDPQTGDGGQLMGAAYKFKSIQRSLDANLNGPVRLFGLTHELLGGVTYAQGETRQDTARF LNLPNTPVNVYRWDPHGVPRPQIGQYTSPGTTTTTQKGLYALGRIKLAEPLTLVVGGRESWWDQDTPATRFKPGRQFTPYGGLIWDFARDWSWYVSYAEV YQPQADRQTWNSEPLSPVEGKTYETGIKGELADGRLNLSLAAFRIDLENNPQEDPDHPGPPNNPFYISGGKVRSQGFELEGTGYLTPYWSLSAGYTYTST EYLKDSQNDSGTRYSTFTPRHLLRLWSNYDLPWQDRRWSVGGGLQAQSDYSVDYRGVSMRQGGYALVNMRLGYKIDEHWTAAVNVNNLFDRTYYQSLSNP NWNNRYGEPRSFNVSLRGAF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site