Pseudomonas aeruginosa AZPAE14963, NS79_RS12155
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14963 AZPAE14693_contig_13_Average_coverage:_95.40, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGTTTCACACGCCGATCATCTTCGTCGGGCACTCTGGAAACCTCTCTCTTCGCGGAGCGGCATCCGGTGAAGCGACCCCGGCAAGGCGGTTTCACCCTG ATCGAACTGATGGTGGTGCTGGTAATCGTCGGCATCGCCACGGCGGCCATCAGCCTGAGCGCCCGCCCCGACCCGACGGGCCTGCTGCGCCAGGATGCCG CGCGCCTGGCGCGGTTGCTGGAAATAGCCCAGGGCGAAGCGCGGGTACGCGGTACGCCGATCCTCTGGCAGCCCAGCGCCAAGGGCTATCGCTTCAGCCC GCAGGCCTATCGCGGCAAGACCGACGCCTTCGCCGCCGACACCGAATTGCGCGCGCGCGACTGGCAGGCCGCGCCGCTGCGGGTCAGCGTGCGCCCGCCG CGACCGGTGTTGCTGGACGCCGAATGGATCGGCGCGCCGTTGCGGATAACGCTCTCCGACGGCCAACACAGCGTCACCGTGCTGCGCGAGGCGAACGGCC
|
|
| DNA Sequence for Gene |
>NS79_RS12155
ATGTCCGGGTACGCTGAACGCGCGACGACGCGGCGCCGGCAAGCCGGCTTCACCCTGATCGAGGTGATGGTCGCGATCATGCTCATGGCCATCGTCAGCC TGATGGCCTGGCGCGGCCTGGACAGCATCGCCCGGGCCAGCGCGCACCTGGAGGACAGCACCGAGCAGGGCGCCGCGCTACTGCGCGCGCTGAACCAACT GGAGCGCGACATCGCCCTGCACAGCGCCATCCGGGAGGAGTCCGGCCTGCCCAGCGGCGACGAGCCGATCCGGGCCGGCGACAGCCTGCCGCCCGGACTC GCACTGAAGCGCCTGAGCGAGATCCCATTGCGCCTGGACATCGTCCGCGCCAGTACCGAGCCAGGCGCGCCGCTGCAGCGCGTGCGCTGGTGGCGACAGG GCAAGATCCTCTACCGCGCCGCCTCGCCCAGCGGCGACCGCCTGCCGTTGCCGCCGCTGGCGGAGCGGGTGGCTGTGCTGGACGACGTGAGTCGGTTCGA GATCCGTGCCTGGGTGCCGGGAAAGGGCTGGACGCGCCTGCCGGCACGCAGCAAAGTCCGCGCCAGCGGACTGGAGATCAGCCTGGCGCGGGTCACCCGC AACGGCGTGGAGCGCTATCGACGGGTGGTGGCCCTGCAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AGCGGTGGCTCAGCCGAGCAGCACCACCCCGCCCGGCAGGCGGGTGACCTCGATGCCATAGGCATCGCGGATCAGGGTCGCCACGTCGGCCAGTTGATCG AGGCTGAAACGGGCCTGGACCCGGCGTCGGCCAAGGGCCTTGTCCAGCAGCAGGAGCATGCCGGGACGGTAGCGGTTGATTTCGTCGATCACCGTGGCCA ACGGTACGTCGTTGAACACCAGCATGCGCTCGCGCCAGGCCATCACCTCGGCAACGTCGAAAGGCACCGGCGGACCGTTGCGTCGCTCGTCGAAGGTCAG CTGCTGGCCGGCCTGGAGGTCCAGGCGCTGACCGAGGTGTTCGAGCCGCACGCTGCCCTCCAGGCAAGTCACCACGCAAACGTCACCGCTGCTGCGCACA TTGAAGCGGGCCCGGCTGGCGCTCAGCCAGGCGCTCCCGGCCATCACCCGCAGGCTGCTCTGCGGCGGGTGGCTGGCGATGATCTCGGCCTCGCCGCCGA
|
|
| Amino Acid Sequence |
>general secretion pathway protein GspJ
MSGYAERATTRRRQAGFTLIEVMVAIMLMAIVSLMAWRGLDSIARASAHLEDSTEQGAALLRALNQLERDIALHSAIREESGLPSGDEPIRAGDSLPPGL ALKRLSEIPLRLDIVRASTEPGAPLQRVRWWRQGKILYRAASPSGDRLPLPPLAERVAVLDDVSRFEIRAWVPGKGWTRLPARSKVRASGLEISLARVTR NGVERYRRVVALQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|