Pseudomonas denitrificans ATCC 13867, H681_09055 (flhA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas denitrificans ATCC 13867, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GATGGCGAGCGGCTTGCGAACCAGCGAGGCTCGCATGCTCATGGTGCTGGAGAAGGACGCCAATGTGGATGTCCCGACTCTCCAGTCGCTGGTGGCAATG CCGTCGCGCGAAATCGACGAGGCGCAGTCAAACCTATTGCGCAAGGGCTGGTTGCAGGTCAGTGAGAATGGCTGCGGACTAACCCCGGCGGGCATTGACC AGGCTGAGATGTTGTGGCACATCGCCGAGGAGCAGCAGGCAAAGACTTTTGCGCGCTTTACTCCGGCGCAGATCGACACATTCACGGAGGTGCTGAAAGG CTTGATTCGCCCTCTATAGGGCTGACTGCGCAGGCCGGGCGAGCCGATCGCAGGGCGCCCGGCCTGTTCTGCCGATGTGAAATCGGCGCGCTTTCAAAAA GTTGGAACGCTTCCTGCTAAACCCTCTGCAAACGCCCGCTTGGGCGTCAAAAGTTTGATCCGGCGGGCGCGAGTCCCGCCGCAGGGCAGGGGAGTCGAGG
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| DNA Sequence for Gene |
>H681_09055
|flhA
GTGGACCGCACGCAACTGATCAGCAACGTTCGCAGCAATCTGGCGGGCCTGGGCCGGGGCAATCTCGGCGTGCCGCTGCTGCTGCTGGCCATGCTGGGCA TGATGACCCTGCCGATCCCGCCGTTCCTGCTGGACGTGCTGTTCACCTTCAACATCGCCCTGTCCATCGTGGTCCTGCTGGTCTGCGTGTACGCGCTGCG GCCGCTGGACTTCGCCGTGTTCCCGACCATCCTGCTGGTCGCAACCCTGTTGCGCCTGGCGCTGAACGTCGCTTCCACCCGCGTGGTGCTGCTCCACGGC CATGACGGCCACGCTGCCGCAGGCAAGGTGATCCAGGCATTCGGCGAGGTGGTGATCGGCGGCAACTACGTGGTCGGCATCGTGGTCTTCGCGATCCTCA TGATCATCAACTTCGTGGTGGTTACCAAGGGCGCCGGGCGTATCTCCGAGGTGAGCGCGCGCTTCACCCTCGACGCCATGCCCGGCAAGCAGATGGCTAT CGACGCCGACCTCAACGCCGGCCTGATCGAGCAGGCGGAGGCCAAGAAGCGCCGCGCCGAGGTGGCCCAGGAGGCGGACTTCTACGGTTCGATGGACGGT GCCAGCAAGTTCGTCCGTGGCGACGCCGTCGCCGGCCTGCTGATTCTCTTCATCAACCTCATCGGTGGCATCGCCATCGGCATGCTCCAGCACTCGATGA GCTTCGGCGACGCCGGCAAGGTCTACGCCCTGCTGACCATCGGTGACGGCCTGGTGGCGCAGTTGCCGTCGCTGCTGCTGTCCACTGCCGCGGCGATCAT GGTGACCCGCGTCTCCAGCGCCGAGGACATGGGCCAGCAGGTCAACCGGCAGATGTTCGCCTCGCCCAAGGCGCTGGCGATTTCCGCCGCGATCCTGATC GCGATGGGGCTGGTGCCGGGCATGCCGCACGTTTCCTTCATTGGTCTCGGCGGTCTGGCTGCTGGCGGCGCGTACCTGATCTGGCAACGCCAGCGCCAGG CGGCGCAGCAGGCCGAGCAGGAAACCCAGCGCCAGCAGGAACTGCTGCCGGCCCAGCGCGCCCAGGAAACCAAGGAACTGGGCTGGGACGACGTGACCCC GGTGGACATGGTTGGCCTGGAGGTCGGTTACCGCCTGATTCCGCTGGTGGACCGCAACCAGGGCGGCCAGTTGCTGGCGCGGATCAAGGGCGTACGCAAG AAGCTGTCCCAGGACCTGGGCTTCCTGATGCCCTCGGTACACATCCGCGACAACCTCGACCTGCTGCCCAACGCCTACCGCCTGACGCTGATGGGCGTGA GCGTGGCCGAAGCCGAGATCTACCCGGACCGCGAGCTGGCGATCAACCCTGGCCAGGTGTTCGGCACCCTCAACGGTATTGCCGGCAAGGACCCGGCATT CGGGCTTGAAGCGGTGTGGATCGAGCCGTCCCAGCGCGACCAGGCGCAGTCCCTGGGCTACACCGTGGTGGACGCCAGCACCGTGGTCGCCACCCACCTC AACCAGGTGCTGCACAAGCACGCCCACGAGCTGCTCGGCCACGAGGAGGTCCAGCAACTGATGCAACTGCTGGCCAAGACTTCGCCCAAGCTCGCCGAAG AGCTGGTGCCGGGGATGATTTCCCTGTCGACTCTGCTCAAGGTCCTGCAGGCGCTGCTGCAGGAGCAGGTGCCGGTGCGTGACATCCGCACCATCGCCGA GGCCATCGCCAACGTTGCCGCCAAGAGTCAAGATCCCGCCGCGATGGTGGCGGCGGTTCGCGTCGCGCTGTCCCGCGCAATCGTGCAAACCATTGTGGGA CTAGAGCCGGAGCTGCCTGTGATTACCCTGGAACCCAGGTTGGAACAGATATTGCTCAATAGTCTTCAGAAGGCCGGACAGGGCTCCGAAGACGGCATGT TGCTGGAGCCCGGAATGGCCGAAAAGCTGCAACGCTCGATGGTCGAGGCGGCGCAGCGCCAGGAAATGCTCGGCAAGCCGGCGATCCTGCTGGTGGCCGG TCCGGTCCGCGCAATGATGTCCCGATTCGCGCGGATGGCGGTCCCCACCATGCACGTGCTGGCTTACCAGGAAATCCCGGACAACAAACAAGTCACTATC GTTGCCACCGTTGGGCAGCAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGGAAGTTGGATAGAGTGCATCGAGGTCCCAGGCCATGCAGGTAAAACGCTTCTTCGCCGCCGATATGCGTCAGGCCATGAAACTGGTCCGCGACGAGT TGGGCCCGGACGCCGCGATCATCGGCAATCGCCGTGTCGCCGGCGGCGTCGAGCTGACCGCGGCGCTGGACTACCAGGCCCCGGTGGCGGCGAGCAAGCC GAACCCGGCGCTGGAAGCCGAACTGCGCAAGACCCAGGCGCGCATCGCCGAGGCCAAGGCCGAACTGAGCGAGCCGGCTCGCATGAGCGAGGCCGTGCGC AAGGACCGTCAAATGTACGGCGCCGAAGCGCCGCGTCGCAGCGCTGCCGAAACCCTCGCCGAAACCATGACCGCACCGGCGGCCGCCAGCGTCGGCCAAC AGGCGCTGGACGCCATGCGCTTCGAGCTCAACGGCCTGCGTGAACTGATCGAAGTGCAACTGGGCTCCATTGCCTGGAACCAGTTGCAGAACCAGCGTCC
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| Amino Acid Sequence |
>flagellar biosynthesis protein FlhA
MDRTQLISNVRSNLAGLGRGNLGVPLLLLAMLGMMTLPIPPFLLDVLFTFNIALSIVVLLVCVYALRPLDFAVFPTILLVATLLRLALNVASTRVVLLHG HDGHAAAGKVIQAFGEVVIGGNYVVGIVVFAILMIINFVVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIEQAEAKKRRAEVAQEADFYGSMDG ASKFVRGDAVAGLLILFINLIGGIAIGMLQHSMSFGDAGKVYALLTIGDGLVAQLPSLLLSTAAAIMVTRVSSAEDMGQQVNRQMFASPKALAISAAILI AMGLVPGMPHVSFIGLGGLAAGGAYLIWQRQRQAAQQAEQETQRQQELLPAQRAQETKELGWDDVTPVDMVGLEVGYRLIPLVDRNQGGQLLARIKGVRK KLSQDLGFLMPSVHIRDNLDLLPNAYRLTLMGVSVAEAEIYPDRELAINPGQVFGTLNGIAGKDPAFGLEAVWIEPSQRDQAQSLGYTVVDASTVVATHL NQVLHKHAHELLGHEEVQQLMQLLAKTSPKLAEELVPGMISLSTLLKVLQALLQEQVPVRDIRTIAEAIANVAAKSQDPAAMVAAVRVALSRAIVQTIVG LEPELPVITLEPRLEQILLNSLQKAGQGSEDGMLLEPGMAEKLQRSMVEAAQRQEMLGKPAILLVAGPVRAMMSRFARMAVPTMHVLAYQEIPDNKQVTI VATVGQQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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