Strain | Pseudomonas denitrificans ATCC 13867, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AGCCGTGGAGCGCCGACGAGCTGTCGCGCTTCACCCGCCTGGTGCAGGATGCCGTGGGCTACGACGCCAGCCGTGGCGACAGTGTCAGCGTGATCAACGC GCCGTTCGCCCCCGAGCAGGGCGAGGAGATCGTTTCCCCGCCGTTCTACTCGCAGCCCTGGTTCTGGGACGTGGTCAAGCAGGTGCTGGGCATCGTCTTC ATCCTGGTGCTGGTGCTGGGCGTGCTGCGCCCGGTGCTGAACAACCTGTCCGGCAGCAAGGGCAAGGCCCTGATGGCCGGCGGCGTTGGCGCCGACGGCG GCCTGGGCGAGCTGGGCGGCCTGGACGGCGAGCTGTCGGACGACCGCGTCAGCCTCGGTGGCCCCGCCAGTATTCTGCTGCCCAGCCCTTCCGAGGGGTA CGATGCGCAGCTCAATGCGATCAAGAGCCTGGTCGCGCAGGACCCCGGGCGTGTCGCTCAGGTGGTGAAAGAGTGGATCAATTCCGATGAGTGACCGCAC
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DNA Sequence for Gene |
>H681_08880
|fliG
ATGAGCGAACCTCGGGCGAACGCCAAACTGAACAAGGTCGACAAGGCCGCCATCCTCCTGCTGTCCCTCGGCGAGACCGACGCGGCGCAGGTGCTGCGGC ACATGGGGCCCAAGGAAGTACAGAAGGTCGGCGTGGCGATGGCGCAGATGCGCAACGTGCACCGCGAGCAGGTCGAGCAGGTGATGGGCGAGTTCGTCGA GATCGTCGGCGACCAGACCAGCCTGGGCGTCGGCGCCGACAGCTACATCCGCAAGATGCTCACCCAGGCCCTGGGCGAGGACAAGGCCAACAACCTGATC GACCGTATCCTGCTGGGCGGCAACACCAGCGGCCTGGACAGTCTGAAGCGGATGGAGCCGCGCGCCGTGGCCGACGTGATCCGCTACGAGCACCCGCAGA TCCAGGCCATCGTGGTCGCCTACCTCGATCCGGATCAGGCCGCCGAAGTGCTCGGCCACTTCGACCACAAGGTGCGCCTGGACATCGTCCTGCGCGTGTC CTCGCTGAACACTGTGCAGCCGTCCGCGCTCAAGGAACTGAACCTGATCCTGGAGAAGCAGTTCGCCGGCAACGCCAATTCCACCCGCACCACGATGGGC GGCGTGAAGCGCGCGGCGGACATCATGAACTTCCTCGACAGCTCCGTGGAAGGCGCGCTGATGGATGCCATCCGCGACGTGGACGAAGACCTCTCCGGGC AGATCGAAGACCTCATGTTCGTCTTCGACAACCTGGCCGACGTCGACGACCGTGGCATCCAGGCGCTGCTGCGGGAGGTGTCCTCCGACGTGCTGGTGCT GGCGCTCAAGGGCTCCGACGAGGCGATCCGCGAGAAGATCTTCCGCAACATGTCCAAGCGTGCCGCCGAACTGCTGCGCGACGACCTGGAGGCCAAGGGG CCGGTGCGCGTCAGCGAAGTGGAGAGCGCGCAGAAGGAGATCCTCACCATCGCGCGGCGCATGGCCGAGTCCGGCGAGATCGTGCTCGGCGGCAAGGGCG GCGAGGAGATGATCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTGGTGCCCCCGGCGAAAGACGAACAGGAGCTCAGCGAGCTGATCCGCGCCCGCGACGTCTCGGGCTTCGACCGCTGGTCGCTGCCCAGCTTCGACCCGG TCAAGCCGCTGCCCGAACCCGAGCCTGAACCCGAACCCGTGGCCGAGGAGCCGCAGATCGAGGAAGTGCCGGAGGAAGAGGTCAAGCCGCTGACGCTGGA AGAGCTCGAGGCGATCCGCCAGGACGCCTACAACGAGGGCTTCTCCACCGGCGAGAAGGACGGCTTTCATGCCGGCCAGTTGAAGGCGCGCCAGGAAGCC GACGCCGCCCTGCAACTGCGCCTGCAATCCCTGGAAACCCTGATGGGGCAACTGTTCGACCCCATCGCCGAACAGGACCAGATGCTCGAGCAGGGCATGC TCAGTCTGGTGACCCACGTGGTGCGCCAGGTGGTGCAGCGCGAACTGGCCACCGATTCGAGCCAGATCCGCCAGGTGCTGCGCGAGGCGCTGAAGCTGCT
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Amino Acid Sequence |
>flagellar motor switch protein G
MSEPRANAKLNKVDKAAILLLSLGETDAAQVLRHMGPKEVQKVGVAMAQMRNVHREQVEQVMGEFVEIVGDQTSLGVGADSYIRKMLTQALGEDKANNLI DRILLGGNTSGLDSLKRMEPRAVADVIRYEHPQIQAIVVAYLDPDQAAEVLGHFDHKVRLDIVLRVSSLNTVQPSALKELNLILEKQFAGNANSTRTTMG GVKRAADIMNFLDSSVEGALMDAIRDVDEDLSGQIEDLMFVFDNLADVDDRGIQALLREVSSDVLVLALKGSDEAIREKIFRNMSKRAAELLRDDLEAKG PVRVSEVESAQKEILTIARRMAESGEIVLGGKGGEEMI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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