Pseudomonas denitrificans ATCC 13867, H681_07855
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas denitrificans ATCC 13867, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATAAAAAATCACTTTTTCTCAACTTTCGGTTGACACCCCGCCCCCCATGCGTAGAATGGCGACCGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCAT AACCCGAAGGTCGTAGGTTCAAATCCTGCTCCCGCAACCAGACACAGGGAAAGGCCACTCTTCGGAGTGGCCTTTTCGTTTGCGCGTAATTTATGCGTGA ATTTAAATTATTGATCGAAAACGAAATATTGATTGACAGACCCTCTCATATCCGTAGAATGGCCGCCGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCT CATAACCCGAAGGTCGTAGGTTCAAATCCTGCTCCCGCAACCAGACATCAAGAAGAAAGCCACTCTTAGGAGTGGCTTTTTTCGTTGCGCCAGAGAAACT GCTTCAGCAAATCTTCGCCCCCAGGAAGAAATCCTCCCGAGGGACTTGGGAAAACGCGCCACTGCCCCTACTCTGTCGCGCAAAATCGATGAGGTGCCCG
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| DNA Sequence for Gene |
>H681_07855
ATGAGCGCCACCCCCTCCGCACCAGACAGCCCCGCCGTCGGCGAACAGCCGCAGCGCAACGGACTTCTGCACTGGATCAACGCCCATCGCCAGGCGATCG GCCTGGGGGTCACGCTGCTGCTGTTCAGCCTCGCGCTGATCGCCTGCCACCACCTGCTGCGCGACATCGATGCCTATTCCCTGCACGACGCCATCCTCGA CGTCCCCACCGCCTCGCTCGCGGGCGCCTTCGCCGCCACCGTCGCGGGATTCATCACCCTGCTGGGCTACGAATGGTCGGCCACCCGCTTCGCCGGGGCG AAACTGTCGCCCTCGGCGCTGCTCACCGGCGGTTTCTCGGCCTTCGCCATCGGCAATGCCGTCGGCCTGTCGATGCTCTCCGGCGGCTCGGTGCGTTACC GCCTCTATGCCCGCCAGGGCCTGGGCGCCGCCGAAGTCGCGCGGATGACCCTGTTCGCCAGCCTCTCGCTGGGCTGCGCCCTGCCGATACTGGCCGCGCT GGCCGCCCTGAGCGACCTGTCCGACGCCGCCCTGGCCCTGCACCTGCCGAGCTGGCTGGTGGCCGTGCTCGCCCTGGGCATCATCGCCTTCTGCATCCTG CTGGTGGTGGGCATCGAGCGCCGCCGCCTGCCGGAACAGCCGTCGCCCGACAGCCACCTGGTGCGCATCGGTCGCCGTACCGTGCGCCTGCCGGGCCTGC GCCTGTCGCTGCTGCAACTGCTGATCACCGCGCTGGACGTGGCCGCCGCCGCCACCGTCCTCTACCTGCTGTTGCCGGAAGCCCCGCCCTTCGGCGCCTT CCTGCTGGTCTACCTGATCGCCCTGGCGGCCGGCGTGCTCAGCCACGTCCCCGGCGGCGTAGGCGTCTTCGAGGCGGTGCTGCTGGCGGCCTTCGCCGGG CAACTGGGTGCCGCACCGCTGGCCGCAGCTCTGCTGCTGTACCGCCTGATCTATGTGGTGCTGCCGCTGATCGTCGCCTGCCTGCTGCTGCTGTTTCTCG AAGCCCGCCGTGTCCTGGTGGCCAGGCAGGCGGTGCGCGTGGCCTCAGGCTTCGCCGCACAGATTCTCTCCCTGCTGGTATTCATCTCCGGCGTCGTGCT GCTGTTCTCCGGCGCCACGCCGTCCATCGATACCCGCCTGAATGAAATCGGCTTCCTGGTGCCGCACCGCCTGATCGATGCCTCGCACCTCGCCGCCAGC CTGATCGGCGTGCTCTGCCTGCTGCTCGCCTACGGCCTGCGCCGCCGCCTGTCCGCCGCCTGGGCGCTGACCCTCGGCCTGCTGGTGGCCGGCGCCGTGC TGTCGCTACTCAAGGGCTTCGACTGGGAAGAAGCGCTGATCCTGAGCGTCACCGCCGCCCTGCTGGTGATCTTCCGCAGCGCCTTCTACCGCCGCAGCCG CCTGATGGATCTGCCCTTCTCGCCGCTCTACCTGGGCGCCGCGGCCTGCGTCATCGGCGCATCGATCTGGCTGCTGCTGTTTGCCTACCAGGACGTGCCC TACAGCCATGAGCTCTGGTGGCAGTTCGCCCTGGATGCCGACGCCCCGCGCGGCCTGCGCGCCGCCCTGGGCAGTTGCCTGCTGCTGGCCGCGCTGGCGC TGTACTGGCTGCTGCGCACCGAGCCGCCGGCGATCCTCGAACCCAGCCGCGAGGAGCTGGATACCGCCGCCGGCATCCTGGCCAACTCGTCGCAGCCGGA CGGCGGCCTGGCCCTGTCCGGCGACAAGGCGCTGCTGTTCCACGAAGGCAACGACGCCTTCCTGATGTATGCCCGCCGCGGTCGCAGCCTGGTGGCACTG TTCGACCCGGTGGGGCCGACACAGTCCCGCGCCGAGCTGATCTGGCAGTTCCGCGACCTCTGCGACCTGCACCATGCGCGCCCGGTGTTCTACCAGGTGC GGGCGGAGAACCTGCCGCTGTACATGGACATCGGCCTGACCGCCCTCAAGCTCGGCGAGGAGGCACGGGTCGACCTGCGCCGCTTCGACCTGGAGAACAA AGGCAAGGAAATGAAGGACCTGCGCTACACCTGGAACCGGGGTCAGCGCGACGGCCTGAGCCTGGAGTTTTACGACGCGGGCCAGGCGCCGATGGAGGAA CTACGGGCGGTCTCCGATGCCTGGCTGGGCGGCAAGAACGTCCGCGAGAAGGGTTTCTCCCTGGGCCGCTTCACCCCCGAGTACCTGAACTACTTCCGCG TCGTGGTGATCCGCCACGAAGGCCGTGCCGTCGCCTTCGCCAACCTGCTGGAAACCGCCAGCAAGGACGTGGCGAGCATCGACCTGATGCGCGTGGCGCC TGACGCGCCAAAGCTGACTATGGAATTTCTCATGCTCGGCCTGATCCTGCATTACAAGGAAAGCGGGCACACCCGCTTCAGCCTTGGCATGGTGCCGCTC GCCGGCCTGCAGCCGCGCCGTGGCGCGCCGCTGACCCAGCGCCTGGGCGCCCTGGTCTTCCGCCGGGGCGAGCAGTTCTACAATTTCCAGGGGCTGCGCC GCTTCAAGGACAAGTTCCAGCCCGACTGGGAGCCCCGTTACCTGGCCGTGCCCGCCGGACTGGATCCGCTGGTGGCCCTGGCCGACACCGCCGCGTTGAT CGCCGGCGGCCTGAGTGGATTGGTGAAACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AATGTCGAAACGTCGCTGGCGGCATCTGCTCGCCCTGCTCCTGCTGATCCTCATCGCCGCCGGACTGTTGCTGTGGAGTCGCCCCGCGTCCCAGGCGGTC GTGGAACACCATCAGTTGCCCGACGGCAGCGCCGTCAGTCTGGCCATCCCTGGCAAGCAACCCAATGCGCGCGTCCTGCTGGCGGTACAACCGGACCAGA AGCTGGACGACGGCCAACTGCTGGCCCTGGCTCACGACAGCGGGGCCCGCGTGGTGCAGTTCGTCTTCCCGGACAAGGATTGCGCCGCCCAGCAGGCGCG CATCAAGGCCGCTGGCGAGTTGCTCGACGGCCAGCCGACCCTGGTTGCCGGCATCGGTCCGGGCGGCACCTATGCCTGGCGCTGGCTCGCCGGACAGAGC GACGACAAGGCCCGCGCCCTGTCGGTCGGTTTCTCCCTGGAAAAGCCCGACTGCGCCGCCGCCCCCCTGCCGCAAAGCGCCGCCCACGGCCGCTGGCTGG
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| Amino Acid Sequence |
>transmembrane acid tolerance protein
MSATPSAPDSPAVGEQPQRNGLLHWINAHRQAIGLGVTLLLFSLALIACHHLLRDIDAYSLHDAILDVPTASLAGAFAATVAGFITLLGYEWSATRFAGA KLSPSALLTGGFSAFAIGNAVGLSMLSGGSVRYRLYARQGLGAAEVARMTLFASLSLGCALPILAALAALSDLSDAALALHLPSWLVAVLALGIIAFCIL LVVGIERRRLPEQPSPDSHLVRIGRRTVRLPGLRLSLLQLLITALDVAAAATVLYLLLPEAPPFGAFLLVYLIALAAGVLSHVPGGVGVFEAVLLAAFAG QLGAAPLAAALLLYRLIYVVLPLIVACLLLLFLEARRVLVARQAVRVASGFAAQILSLLVFISGVVLLFSGATPSIDTRLNEIGFLVPHRLIDASHLAAS LIGVLCLLLAYGLRRRLSAAWALTLGLLVAGAVLSLLKGFDWEEALILSVTAALLVIFRSAFYRRSRLMDLPFSPLYLGAAACVIGASIWLLLFAYQDVP YSHELWWQFALDADAPRGLRAALGSCLLLAALALYWLLRTEPPAILEPSREELDTAAGILANSSQPDGGLALSGDKALLFHEGNDAFLMYARRGRSLVAL FDPVGPTQSRAELIWQFRDLCDLHHARPVFYQVRAENLPLYMDIGLTALKLGEEARVDLRRFDLENKGKEMKDLRYTWNRGQRDGLSLEFYDAGQAPMEE LRAVSDAWLGGKNVREKGFSLGRFTPEYLNYFRVVVIRHEGRAVAFANLLETASKDVASIDLMRVAPDAPKLTMEFLMLGLILHYKESGHTRFSLGMVPL AGLQPRRGAPLTQRLGALVFRRGEQFYNFQGLRRFKDKFQPDWEPRYLAVPAGLDPLVALADTAALIAGGLSGLVKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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