Pseudomonas denitrificans ATCC 13867, H681_07245
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas denitrificans ATCC 13867, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGATCCGCTACCGTCTCGACGGCGAAGTGAAGACCGGCCTGCTGTTCGGCCAAGACGTGCACATCGCTCGCAATGGCGAGATAATTCCCGGCGATTTC ATCCCCGAGTGAGCTTCACCATGAGCCAGGAACCCCACGTACACGGTCCGAACTGCAACCACGACCATGATCACGATCACCACCATGACCACCATGACCA CGGTCACGTGCACGGCCCGCACTGCAACCACAGCCACGAGCCGGCACGCAATCCGCTGAAGGACGTGGGCCGCAACGATCCATGCCCCTGCGGCAGCGGC AACAAGTTCAAGAAGTGCCACGGCGCCTGAACCACGCCCTGACGCACCCCGCAGAAGGCCCGCCCAGTGCGGGCCTTCTGCTGTCCGTCCCGACGCTCGG CCAGCCGCTGAAAATCCCGCCGCGCGTGGCTTGCACAGCCTCCCTCGGCTCACTAACGTAGCGCCTTTCCACGCGACCCTTTGTGCAGGAGCACACCCTC
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| DNA Sequence for Gene |
>H681_07245
ATGGCCCCGCGAGCCTTCCGCCGGCTTCCCAGCTTCGGCCTTGCCGCCACCCTCAGCGCCGCCGTCAGCCTCGCCGGCTGCCAGAGCTGGCTGAACGACC GTTACGCCGGCAGCGTGACGCCCACCAGCGGCGTGCAGCCGATCAAGGGCCTCGCGGACAACGTATCGATCCGCCGCAACAGCCTGGGCATGCCGTTGAT CGAGAGCAGCAACTTCCACGACGCGCTGTTCACCCTGGGCTACGTGCACGCCAGTGACCGCATCAGCCAGATGGTCGGCCTGCGCCTGATGGCCCAGGGG CGCCTGTCGGAAATGGTCGGCCCCGGCGCACTGGAAACCGACCGTTTCATGCGCACAGTGAACCTGAAGAAGGCGGCGGACGCCCTCTATGCCGGCGCCT CGCCGCGCATCAAGCGCTTCTTCGAGACCTATGCGCGCGGCGTCAACGCCTACCTGTTCCGCTACCGCGACAAGCTGCCGATGGACCTGGCCGAATCCGG CTACCGCCCCGAGTACTGGAAGCCAGAGGATTCCGCGCTGGTCTTCAGCCTGCTGAACTTCGGCCTGGCGGTGAACCTGCAGGAGGAAATCGCCTCGCTG GTGCTCGCTCAGAAAGTCGGCGCCGACAAGCTGCCCTGGCTGACACCGATCTACCCGGACGAAGCGCTGCCTCTCGAGGAGGCCGAAAAGCTCAAGGGCC TGCGCCTTGACGGCAAGATTGCCGGCCTCGACGCCCTCGACCGCGCCGCCGGCCAGATCGCCGCCCTGCAGATGATGGGCGTCGCCGCCTCCAACAACTG GGCCATCGCCCCGCAGCGTACGCGCAGCGGCAAGAGCCTCCTGGCCAACGACACCCACCTGCCGCTGTCCATGCCCTCGGTGTGGAACTACGTGCAGATC CGCTCGCCGAAGTTCAGCGCCGCCGGCGTCTCCATCGCCGGCGTACCGGGCGTGGTCGCCGGCTTCAACGGCAAGCTGGCCTGGGGCATGACGATGGTCA TGGGCGACAACCAGGACCTCTTCCTCGAACAGGTGAAGCGCCAGGGCGGCAAGCTCTACTACCTCGCCAACGGCCAGTGGAAGCCGGCCATCGAACGCAA CGAGACGTTCTTCATCAAGGGCCAGCGGCCGGTCCGTGAGATCATCTACGAGACCCGCCACGGCCCGCTGCTCAACAGCGCCCTGGGCGAGCGCAAGCAC GAGTGGCAGCCGCTGCCGCTGTCCAGCGGCTACGGCATTGCCTACCAGAGCATCCAGGGCGAGTCCGACCGTACCCTCGACGCCTTCTTCGACCTGTCCC GTGCGAAGAACGTCGAACAGGCCTTCGATGCCACCCGCGACGTGCGTGCGATGGCGCTGAACATCCTGTTCGCCGACGAGAAGCACATTGGCTGGCAAGT CACCGGGCGCTTCCCCAACCGCAAGGAAGGCCGCGGCCTGCTGCCCTCTCCCGGCTGGGACGGCCGCTACGACTGGGACGGCTACGCCGAGCCGATCCTG CACCCGTCCGACCAGGACCCGGCACAAGGCTGGCTGGGCACCGCCAACCACCGCACCGTGCAGCCCGGCTACGGCGCGCAGCTGTCCAGCTCCTGGTACT ACCCGGAGCGCTACGAGCGCATCGCGCAACTGGCCGGCGCCAGCAAGAGCCACGATTACCGCAGCATGATCGCCATGCAGTACGACCAGACCACGCCGTT TGCCGGCAAGCTGCAATCGATGCTGGACGCACCGGGCATGGCGCAACCGCTGAAGAAGGCCATCGACGCCCTGCCCACCGACCAGCGCGCCCGTGCCCGC GAAGCGCTGGACCGGATCATGGCGTTCGACGGCAAGCTCTCGCCGACCTCCTCCGACGCCGCTCTGTACGAGGCCTTCCTGCAGGAAAGCAGCAAGCAGA TCTTCCTCGACGAACTGGGGCCGGAAGACAGCCCGGCCTGGAAAGCCTTCGTGGAGAACGCCAATCTCTCCTACTCGGCCCAGGCCGACCACCTGCTGGG CCGCGACGACAGCCCGTTCTGGGACGACGCCCGCACCCCGCAAAAGGAAGACAAGCCGGCGATCCTCGCCCGCAGCCTGGCCGCCGCCATCGCCTTCTGC GAGCAAACGCTGGGCAGCGACCGCCGCGCCTGGCAATGGGGCAAGCTGCACACCTACGAATGGCTCAGCGACAGCACCAGGATGGCGCCCAACCTGAGCG CCGGCCAGCGCGCCAGCCTCAACGCCATCAAAGGCTACCTGGACCGTGGCCCCTACCCCGCCGGCGGCGACCACACGACGCTGAACGTCTCGGCCTATCA CTGGGGCCAGGACTTCGATACCTGGCTGATCCCGGCCATGCGCATCGTCGTCGACTTCGGCCAGAGCGAGCCGATGATCGGCCTCAACAGCAGCGGCCAG TCCGGCAACCCGGCCAGCCCGCACTATGCCGACGGCATCGACGCCTGGCTGAAGGGCAACTACATGAGCTTCCCCTTCCAGTCGCAGAACCTGGAGAAGG TCTACGGCGTGAAACGCCTGACGCTGGTCCCGGGCAAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGACTGAAAAAATTCTCCGGGGTCGGGAACTTGTGTCCCATCCCGGAATCAGAACAGTCGACTTACTCCATGATCATATTCGGGCACCCCTTGGGTGCC TTTCTTTTTTCCCGCCTCACTCCCGCTGTACGCCCCTTCTGCAAGAACCTTCCCGGTTGACACTCCCACGCATCCTTTCGACCAGGAGTCATCGTCATGT CCGAATCCCTCATCGTCATCACCGGCGGCCCCGGCGCCGGCAAAAGCACGCTGCTCGAACACCTGCACCACCATCACGGCCTGAACACCGTCGAGGAAGG CGGTCGGGCGATCATTCGCGAGCAGTTGGCCAGCGGCGGCGATGCCCTGCCGTGGGCGAACCGGGAGGCCTTCTGCCAGGCGATGCTCGCGCACGCGCTG ACGACCCGCGAGCGAGCGCTCGATGCGGGTGGATTGTGGCTGTTCGATCGTGGCCTGCCGGATGTGCTGGGGTATGCGCGGCTCTGCGGCCTGCCGATTC
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| Amino Acid Sequence |
>putative penicillin amidase
MAPRAFRRLPSFGLAATLSAAVSLAGCQSWLNDRYAGSVTPTSGVQPIKGLADNVSIRRNSLGMPLIESSNFHDALFTLGYVHASDRISQMVGLRLMAQG RLSEMVGPGALETDRFMRTVNLKKAADALYAGASPRIKRFFETYARGVNAYLFRYRDKLPMDLAESGYRPEYWKPEDSALVFSLLNFGLAVNLQEEIASL VLAQKVGADKLPWLTPIYPDEALPLEEAEKLKGLRLDGKIAGLDALDRAAGQIAALQMMGVAASNNWAIAPQRTRSGKSLLANDTHLPLSMPSVWNYVQI RSPKFSAAGVSIAGVPGVVAGFNGKLAWGMTMVMGDNQDLFLEQVKRQGGKLYYLANGQWKPAIERNETFFIKGQRPVREIIYETRHGPLLNSALGERKH EWQPLPLSSGYGIAYQSIQGESDRTLDAFFDLSRAKNVEQAFDATRDVRAMALNILFADEKHIGWQVTGRFPNRKEGRGLLPSPGWDGRYDWDGYAEPIL HPSDQDPAQGWLGTANHRTVQPGYGAQLSSSWYYPERYERIAQLAGASKSHDYRSMIAMQYDQTTPFAGKLQSMLDAPGMAQPLKKAIDALPTDQRARAR EALDRIMAFDGKLSPTSSDAALYEAFLQESSKQIFLDELGPEDSPAWKAFVENANLSYSAQADHLLGRDDSPFWDDARTPQKEDKPAILARSLAAAIAFC EQTLGSDRRAWQWGKLHTYEWLSDSTRMAPNLSAGQRASLNAIKGYLDRGPYPAGGDHTTLNVSAYHWGQDFDTWLIPAMRIVVDFGQSEPMIGLNSSGQ SGNPASPHYADGIDAWLKGNYMSFPFQSQNLEKVYGVKRLTLVPGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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