Strain | Pseudomonas denitrificans ATCC 13867, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AGCGCACTCGACCCGCAGACCACCGGCCAGGTCCTGCAACTGCTGGCCCAGATCAACCGCGAGCTGAAGCTGACCATCGTCCTGATCACCCACGAGATGG ACGTGATCCGCCGTGTCTGCGACCAGGTGGCGGTGATGGACGCCGGCGCCATCGTCGAGCAGGGCCACGTCGCCGACGTGTTCCTCCATCCGCAGCACGA AACCACCCGCCGCTTCGTCTTCGAGGCCGAGCGCGTCGACGAGGACGAGCAGCACGACGACTTCGCCCACGTGCCGGGGCGCATCCTGCGCCTGACCTTC CGCGGCGAGGCGACCTACGCGCCGCTGCTGGGCACCGTCGCGCGCCAGACTGGCGTCGACTACAGCATCCTCGCGGGGCGTATCGACCGCATCAAGGACC AGCCCTACGGCCAGCTCACCCTGTCGCTGGTGGGCGGTGATATCGACGCTGCCGTGGCGCAGCTGAACGCCGCCGAAGTCCACGTCGAGGTGCTGCGCAC
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DNA Sequence for Gene |
>H681_00980
ATGAATGCTTTCTTTGAAAACCTGGGCTTTGTGAATATCGACTGGTCCGAGATCCTCCAGGCCAGCATCGACACCTTCTGGATGCTCGGCGGTTCGCTGT TGTTCACCATCGTCCTGGGCCTGCCGCTGGGCGTGCTGCTGTTCCTCACCGGGCCCAGGCAGATGTTCGAGAACCGCGCGGTGTACGCCCTGCTGTCCTT CGTGGTGAACGTGCTGCGCTCGCTGCCCTTCATCATCCTGCTGATCGTGATGATCCCGTTCACCGTGCTGGTCACCGGCACCTCGCTGGGCGTCGCCGGG GCCATCCCGCCGCTGGTGGTGGGCGCCACGCCGTTCTTCGCGCGCCTGGTGGAAACCGCGCTGCGCGAGGTGGACAAGGGCATCATCGAAGCGACCCAGG CGATGGGCGCCAGCACCCGCCAGATCATCTGGAACGCGCTGCTGCCCGAGGCCCGTCCGGGCATCATCGCCGCCGTCACCGTCACCGCCATCACCCTGGT GTCCTACACCGCGATGGCCGGCGTGGTCGGCGCCGGCGGCCTCGGCGACCTGGCCATCCGCTTCGGCTACCAGCGTTTCCAGACCGACGTCATGGTGGTC ACCGTGGTGATGCTGCTGGTGCTCGTACAGATCCTGCAGACCGTCGGCGACAAGCTGGTGGTCCACTATTCCCGCAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGCACGGCCCGCCGGACGCGGGCTTTTCTCAGGAGCCAACAATGAAAAAACTGCTCGCCGCTTTCGCCGCCGTCGCAGCCATCTCCGCCCCGCTGGCCC AGGCCACCGACAGCCTGACCGTCGCCGCCACCCCGGTGCCGCACGCCGAGATCCTCAACTTCGTCAAACCCATGCTGGCCAAAGAAGGCGTGGAACTGAA GGTCAAGGAGTTCACCGACTACGTGCAGCCCAACACCCAGGTGGCCGAGAAGCGCCTGGACGCCAACTTCTTCCAGCACCAGCCGTATCTGGATGAGTTC AACAAGTCCAAGGGCACCCACCTGGTGGCCGTGACCGGCGTGCACATCGAGCCGCTGGGCGTCTACTCCAGCAAGATCAAGAAGCTCGACGAGCTGCCGG CCGGCGCCACCGTGGTCATCCCCAACGACGCCACTAACGGCGGCCGCGCCCTGCTGCTGCTGGACAAGGCCGGTGTGATCAAGCTCAAGGACAACACGTC
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Amino Acid Sequence |
>ABC transporter permease
MNAFFENLGFVNIDWSEILQASIDTFWMLGGSLLFTIVLGLPLGVLLFLTGPRQMFENRAVYALLSFVVNVLRSLPFIILLIVMIPFTVLVTGTSLGVAG AIPPLVVGATPFFARLVETALREVDKGIIEATQAMGASTRQIIWNALLPEARPGIIAAVTVTAITLVSYTAMAGVVGAGGLGDLAIRFGYQRFQTDVMVV TVVMLLVLVQILQTVGDKLVVHYSRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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