Pseudomonas poae RE_1-1-14, H045_23885
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas poae RE*1-1-14, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGCTTTGCCATGCTCGACATCGACCACTTCAAGCGGGTCAACGACAGCCACGGCCACCCCATGGGCGACCGCGTGATCAAGAGCCTGGCGCTGTTTCTCA AGCAGCGCCTGCGCAAGACCGACTACATCGGGCGCTACGGCGGCGAAGAATTCGCCATCGTGATGCCCGATACCGACCTGGAGTCGGCCTGCAGGGTGCT GGATGAGATTCGTGGGCGCTTTGCCGAAATCCACTACCCGGCCAAGCCGCAGGATTTGTGGTGCACCTTTAGCGCCGGGCTGGTGGCGCTGTGCGACGAT TCCGACAGCCTGATGATGGCCGCCCAGGCCGACGAAGCGCTGTACCGCGCCAAGCACGCCGGGCGCAACCGCGTGCATGCCGCGCACGCTTCGAATCAAA GTGCCATCTTTTCACCGGAATCGACTGATTCCGTCATACGGATGTAATGAAAACGCAATAACTTCAGGCACTTACCTTTTGCTGTCGGTAGAAACCTCGC
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| DNA Sequence for Gene |
>H045_23885
ATGCGCCTGAAGCTGCTGACCAATCTCAATACCCTGCTGCTCGTGGCCGTATGCCTGGCGCTGGGGGCGACGCTGTGGTGGTCGCAACGCGCGCTGGAGC GCCCCTATTTGCTCATGGAGCGTTACCTGGGCCTGTCACAGACGTTTCAGAACCAGGCCGCGCGCAATATCGACGACTACCTGGCCAGCGGCGATGCCCT GCGCCTGAGCAGCGCCGGCCAGAGCCTGGAAACCCTGTTGCGGCAGCTCGACGAACTGCCCGCCGAGCTTGCGCAAAGTCTGCGCCCCAGCCTGACTAAC CTGGAAGCCTTCAGCAAAACCGACCTGCTGGCCGCCGGTAAACTGGCCGGCGATCCCCAGGCCCTGTTGCTGCAAGCCGAGCGTGAAGTGGGCGCCAACC TTGACCAGCTCAGTCAGTACGCCAGCGGCGTAAGCTCGGCGGACGCCACCCGCTACCTGCCGCCGCTGCTGGCGGCGTCGCAGCACCTGGGCCGGTTATC CCTGGCCCGCGACAAACTGGTGAGCAGCGGGCGCGCGGAACTGGCCGACGATGTGGAGCGCGAAGTCAGCAATATCCGCACTCAGGCCGAGGTGCTGGAA CACCTGCCGCTGCTGGGCGTCAAGGCCAGCGCCGAGTCCAATGCCGACGATTTTTCAGTGCTGATGGGCCTGGAAAACACCACGCAGACCGAAGCCCAGG ACACTGGCGTGGACCTCAAGCGTGAGCTCAACAGCCTGCTCACCCGCTACCCCGCCGAACTCAAGCGTACCCGCGAACAGATCCAGCAACGCGCTGATCT CGGCACCGCCACCCAACTGAAAATCGCCGCCGTGCAGCAGGCCATTGCCGGGCTGGAGCCGGTGGTGCGCGCCCAGCACGGCAAGATCCAGGGCGAAGTG CGCCTGATGCAAGGGCTGATGATCGGCCTGATCCTGCTGATCGCGCTGCTGATCGACACCCTGCAACGGCACCTGGCGCGCACACTGACCAGCCTGGCAC CGGCCCTGTCGACCTGGGCCGAAGGCGACTTCAGCCAGCCGATTGCCTTGGGCCGGACCAACCGCGAACTGCATGACATCGAAGCGTCCCTCAACCGTCT GCGCACGTATCTGGTGGAACTGGTAGGCACCATTCGCGGCAATGCCGAAGCAGTGGCCGGCACCAGTCGCACCCTGGCCGAGCTGAGCAGCGGCCTGCAC GACGGCGCCGAACGCCAGGCCGGGGACACCGCGCAGATTCGCGACTCGCTGGGCGAACTGGAGGCGACCATCCAGCAGGTTGCCGGCGATGCCAGCCAGG CCGCCGGCGCCAGTCGCAGCGCCGGTCAGGCGGTGGAACAGGGCCAGCGCGTGATCGGCCTGAGCCTGACCGGGCTGCGCGCGCTGGTGGACGAGGTGCA GCAGAACGCGCAGATGATCGAAAAACTCGCGGAAGAATCGGCCACCATCGGCGGCGTGCTCACCGTGATCCGCTCGATTGCCGACCAGACCAACCTGCTG GCGCTCAACGCGGCCATCGAAGCCGCACGCGCTGGCGAGGCCGGGCGCGGGTTTGCCGTGGTCGCCGACGAAGTGCGCTCCCTGGCCCAGCGCACCGCCG GCGCCACTGCCCAGATCCAGAGCCTGATCGCCGGCCTGCAAACCGCCGCCCATCAGTCGGTGCAAGGCATGCGCACCCAGGTCGAACACGCCGAGGCCAC CGCCCAGCAAGCCCAGGCGGCGGATGGCGCGCTGGATGAGATCGTCGGGGCGATCCAGACCATTGCCGAGACGGCGGTGCGTATCGCCGACGTGACCGCG CAGCAAAGCGGCGCAGTGAGCGAGATACGCGACAACAGCGAGCGGATTCATCAACTGGGTGAGGATAATCTGCTGCGGATCGGGCAGGGGCGCAGCCAGG GTGAGCACCTGCTGGTGCTAGGTGGGCAGCTCAATACCGCTGTCACAGCTTTCCGCGTATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAATGTGGGAGCAAGCCAGCTCCCACATTTGAGCTTCGTTACTCCCGCATTTGTTCCCCACAGGATTCGAGACGGTGTTACCTATGACCGAATACCGCCC CCCAGTCACAAATTTTTCGCAATCCTCGCTAATCGTGCTGCCTACTGCATAGAACTGGACAGTCACAAAGGCTTTGCGGCATAGTCGCCGGGTTCTGTCG TACCCACATCAATAACAAGGAACAGCCGATGGCGACCTTTCTGGTCCTTCACGGACCCAACCTGAACCTGCTTGGCACCCGCGAACCGGGCGTTTACGGG GCAGTTACCCTGGACCAGATCAACCTCGACCTGGAACGCAGGGCTCGTGAAGCCGGCCACCATTTGCTCTACCTGCAAAGCAACGCCGAGTACGAATTGA TTGATCGCATCCATGCCGCGCGTGGCGAAGGCGTGGATTTTATCCTGATCAATCCCGCCGCTTTTACGCACACAAGTGTTGCATTACGTGACGCGCTGCT
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| Amino Acid Sequence |
>putative methyl-accepting chemotaxis protein
MRLKLLTNLNTLLLVAVCLALGATLWWSQRALERPYLLMERYLGLSQTFQNQAARNIDDYLASGDALRLSSAGQSLETLLRQLDELPAELAQSLRPSLTN LEAFSKTDLLAAGKLAGDPQALLLQAEREVGANLDQLSQYASGVSSADATRYLPPLLAASQHLGRLSLARDKLVSSGRAELADDVEREVSNIRTQAEVLE HLPLLGVKASAESNADDFSVLMGLENTTQTEAQDTGVDLKRELNSLLTRYPAELKRTREQIQQRADLGTATQLKIAAVQQAIAGLEPVVRAQHGKIQGEV RLMQGLMIGLILLIALLIDTLQRHLARTLTSLAPALSTWAEGDFSQPIALGRTNRELHDIEASLNRLRTYLVELVGTIRGNAEAVAGTSRTLAELSSGLH DGAERQAGDTAQIRDSLGELEATIQQVAGDASQAAGASRSAGQAVEQGQRVIGLSLTGLRALVDEVQQNAQMIEKLAEESATIGGVLTVIRSIADQTNLL ALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAGATAQIQSLIAGLQTAAHQSVQGMRTQVEHAEATAQQAQAADGALDEIVGAIQTIAETAVRIADVTA QQSGAVSEIRDNSERIHQLGEDNLLRIGQGRSQGEHLLVLGGQLNTAVTAFRV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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