Pseudomonas poae RE_1-1-14, H045_22920

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas poae RE*1-1-14, complete genome. [Details]
DNA Sequence Upstream of Gene
GATGGCAGCTTGCTCGACCTTGAGCGGATCGGCCAGGCCCTGCACCAGGCCCTGTCACGCCTGCGCACCTCGGCCCGACAGGCGGCGGTGGCGGTAGCGG GGTCATCGGTGATCACACGGGTGATCGACCTGCAGGCGCGGCTCAGCGACCAGGAGATGGCCCGGCAGATCCAGCTCGAAGCCGACCAGTACATTCCTTA CCCGCTGGACGACGTTGCCATCGACTTTCAAGTGCGCGGCCCCTGTGTCGACAATCCGCAGCGGGTGCAGGTATTGCTGGCGGCGTGTCTGAAGGAACAG GTCGAAACCCGCGAGGCGGTTTTGGCCCTGGCGGGGCTTGTGCCGAGGGTGGTGGATGTCGAAGGGTTTGCATTGGAGCGCGCATGCAGTCAGGATTTCG CCAGCTTCACGCCAGGCCGTCGTGTCGATGGCGCACAATGGGCCGCGGATGCCCACGGGATGGGAGTGGCTTGCGGATTGGCCCTGAGGAGTTTCGCTGG
DNA Sequence for Gene
>H045_22920
ATGACACGAATCAATCTTTTGCCCTGGCGCCAGGCGCTGGCGCAGCGGCGGCGCAAATACTTCCTGGTATTTTTGCTGGCGTTCGTCTGTGTGGCGCTGG CGGCGGTGTGGCTGGCGGATCAGGTCATCGACCAGGCCATCGACCGCCAGGTAACGCGCAACAGCCATGTGGGCAAGGACGTCGCCGCCCAGGATGCTCG GATCAATACCATCGACGACCTGCAGGAGCAAAGCCAGCAACTGGCCGAGCGCATGAAGGTCGTGCAGGACCTGCACGAAGCCCGCTCTGCCGGCGCGCAG TTGCTGGACCAGTTGGCCCGCGCCGTGCCCGAGGGCGTGCATCTGCACGAGGTGGTTGCCCGTGGTGACAGCGTCAGCATCAGCGGCAGCGCTGAATCCA GCCAGGATATCGCTCAACTGATGCGCAGCCTGGAAGCCTCCCAGGGCGCCCACGCGACGCGGCTGCAACATGTGCGGGCGGAGGGGGCAGATGGCCGCAA CGAATTTCAATTGATGGTGCGCCAGGGGGAATCCACCGAGGCCCAGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTGCCCAGGCTCGATCTTTACGCACTCACTCACCACGCTGCCACATGGCCCTTGCCCGGCAAGGTTTTGCTCGGCTGCGCGCTGGCCGGCCTGGCGCT GGTGGTGGGCAACAGTGTGGTGCTGGCGCCGTCCCGCGAGCGGCTGCAAGTGCTCCAGGCGCAGGAAGTGGCCCTGCAACAGGCGCTCTCGCAAAAGGCC GACCTTGCGTCGAGCCTTGAGCGTCGCAGCCATGAGGCCCAGGCGCTGCGGGCGCGGGTTGGCGGGCTGTTCCGGCAATTATCCGCTGAGTCCGATATGC CCGGCCTGCTCGAAGACATCGACCGGCTGGCGGCCGGCAACGGTCTGCTGGTCGACGGCGTGAAGGTGTTGGACGAGCAGCCTCAGCCGTTCTATATCGA GGCGCCGGTGCAGATTGGCGTGGTTGGCACCTACCATGACCTGGCAACCTTCGTCAGCGGCTTGGGCGGGCTGGCGCGGATTGTCACCGTGCATGATCTT
Amino Acid Sequence
>type IV pilus biogenesis protein PilN
MTRINLLPWRQALAQRRRKYFLVFLLAFVCVALAAVWLADQVIDQAIDRQVTRNSHVGKDVAAQDARINTIDDLQEQSQQLAERMKVVQDLHEARSAGAQ LLDQLARAVPEGVHLHEVVARGDSVSISGSAESSQDIAQLMRSLEASQGAHATRLQHVRAEGADGRNEFQLMVRQGESTEAQP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site