Pseudomonas poae RE_1-1-14, H045_17525 (nadD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0009435 | NAD biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00482
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0003824 | catalytic activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00125
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0016779 | nucleotidyltransferase activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00482
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0009058 | biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00125
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | ppz00760 | Nicotinate and nicotinamide metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| MetaCyc | NAD salvage pathway II (PNC IV cycle) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| KEGG | ppz01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| MetaCyc | pyridine nucleotide cycling (plants) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| MetaCyc | NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd02165 | NMNAT | IPR005248 | Nicotinate/nicotinamide nucleotide adenylyltransferase | 5 | 210 | 1.92468E-79 |
| Hamap | MF_00244 | Probable nicotinate-nucleotide adenylyltransferase [nadD]. | IPR005248 | Nicotinate/nicotinamide nucleotide adenylyltransferase | 3 | 211 | 31.290897 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold | 2 | 214 | 5.3E-72 |
| Pfam | PF01467 | Cytidylyltransferase-like | IPR004821 | Cytidyltransferase-like domain | 7 | 184 | 7.3E-26 |
| NCBIfam | TIGR00125 | JCVI: cytidyltransferase-like domain | IPR004821 | Cytidyltransferase-like domain | 5 | 66 | 1.7E-8 |
| SUPERFAMILY | SSF52374 | Nucleotidylyl transferase | - | - | 2 | 211 | 5.32E-53 |
| NCBIfam | TIGR00482 | JCVI: nicotinate (nicotinamide) nucleotide adenylyltransferase | IPR005248 | Nicotinate/nicotinamide nucleotide adenylyltransferase | 7 | 210 | 4.6E-49 |
| PANTHER | PTHR39321 | NICOTINATE-NUCLEOTIDE ADENYLYLTRANSFERASE-RELATED | IPR005248 | Nicotinate/nicotinamide nucleotide adenylyltransferase | 1 | 211 | 9.2E-45 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.