Pseudomonas poae RE_1-1-14, H045_13020 (flhA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas poae RE*1-1-14, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATCTCTAACACTCGTTGTTGTGCAGCGTCTACCTGTCAACTTTGACAGTAGCCAGCAATACCTGTGCGCGGTTCCATTGCATTGAAAACGTGACGCAGGT TTTGAGCTAGATGCGGGGAGAGCGGTGTTGAAGGTGTATAGCGGGGCTGTCAAATCCTACGATCGGATCAGGGAAGAGTGGGTGATTTGGTCTGATGACT GGAAAGATGAAGTATTTGTCGACAAGAGAGATTGGGGCAAGACCAGGTTTTCGGTCGGCCGGAAACTGGCCTTTCAATTGATCCATCGACCCAAAGGCCC GTACGCGCTGCCGCCGATCAAATCAGCCACCCCCAAGCCTTGATGACACAGCGAGACAAAAAATATGGGAGGGGGCAAGCCCCCTCCCATATTTTTTTGA TCCTGATACCAAAACCAAAGTTGGACAGCTTCTTGCAATACCGCCTGCAAGTCGCCTCTTGGCGTCAAAAGTTTGCTTTACGTTACGAGGAATACCGGTG
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| DNA Sequence for Gene |
>H045_13020
|flhA
GTGGATCGCTCTCAAATGTTCGGTACGGCCCGTACGACCCTGACTGACCTCTCGCGGGGCAATCTGGGTGTGCCGTTGTTGTTGCTGGTGATGCTGGCAA TGATGATGTTGCCGATGCCGCCGTTTCTGCTCGACGTGTTCTTCACCTTCAACATTGCCCTGTCCGTCGTGGTCCTGCTGGTCTGCGTGTACGCGCTGCG GCCGCTGGATTTTGCGGTGTTTCCCACCATCCTGCTGGTGGCCACCCTGCTGCGGCTGGCACTGAACGTCGCGTCCACCCGCGTGGTGATGCTGCACGGC CAGGACGGCCATGCCGCCGCCGGCAAGGTGATCCAGGCGTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTTGGTATCGTGGTGTTCGCGATCTTGA TGATCATCAACTTCGTGGTGGTGACCAAGGGTGCCGGGCGCATTTCCGAGGTGAGCGCACGCTTTACCCTCGACGCCATGCCCGGCAAACAGATGGCCAT CGACGCCGATCTCAACGCCGGCCTGATCGACCAGAACCAGGCCAAGAGCCGCCGCCTGGAAGTGGCTCAGGAAGCCGAGTTCTATGGTTCCATGGACGGT GCGAGCAAGTTTGTGCGTGGCGACGCCATCGCCGGTCTGCTGATTCTGTTCATCAACCTCATCGGCGGCATGGCCGTGGGCATCTTCCAGCACGGCATGA CCTTCGGCGACGCCGGCAAGGTGTACGCCCTGCTGACCATCGGTGACGGTTTAGTGGCGCAATTGCCATCACTGTTGTTATCCACAGCAGCGGCCATCAT GGTGACCCGTGCTTCAGGCTCTGAAGACATGGGCAAGCAGATCAGTCGGCAGATGTTCGCCTCGCCCAAAGCCCTGGCCGTGGCGGCGGGCATCATGGCG ATCATGGGCATCGTGCCGGGCATGCCCCACGTGTCGTTCCTGACCATGGCGGCCCTGGCTGGCGGCGGTGCTTACCTGTTCTGGAAAAAACAGAACGCGG TCAAGGTGCAGGCCCTGCAGGAAGTGGCGCGCCAGCAGGAATTGCTGCCATCCCCGGCCCGCGCCCAGGAAACCAAGGAACTGGGCTGGGACGACGTGAC CCCAATCGACATGATCGGCCTGGAGGTCGGCTACCGCCTGATTCCACTGGTGGACCGCAACCAGGGTGGCCAGTTGCTCGCGCGGATCAAGGGTGTGCGC AAGAAACTGTCCCAGGACCTGGGCTTCCTCATGCCCACTGTGCACATTCGCGACAACCTCGACCTGGCTCCCAGTGCCTATCGCCTGACCCTGATGGGCG TGATCCTCGCCGAAGCCGAGATCTACCCGGATCGGGAACTGGCGATCAACCCGGGCCAGGTGTTCGGCAGCCTCAACGGCATTACCGCCAAAGATCCGGC TTTTGGCCTGGAAGCGGTGTGGATCGAAGTCAGCCAGCGCAGCCAGGCGCAATCACTCGGTTACACCGTGGTGGACGCCAGCACCGTGGTCGCCACCCAC CTCAACCAGATCCTCTACAAGCACTCCCACGAGCTGATCGGGCACGAGGAAGTCCAGCAATTGATGGGTTTGCTCGCCAAGGCCTCGCCAAAGCTCGCCG AGGAGCTGGTGCCGGGCGTGCTCTCGCTGTCGCAGTTGCTCAAGGTGCTGCAGGCGCTGCTGGCCGAACAGGTGCCGGTGCGCGACATTCGCAGCATTGC CGAGGCTATCGCCAACAACGCCGCCAAGAGTCAAGATACCGCCGCGTTGGTGGCTTCGGTGCGCGTTGGATTGTCCCGCGCAATCGTGCAAAGCATTGTA GGGCTTGACTCCGAGCTGCCTGTTATCACCCTGGAGCCAAGGTTGGAACAGATCTTGCTCAATAGTATTCAGAAGGCAGGATTAGGCCAGGAAGAGGGCG TTCTGCTGGAGCCAAGCATGGCTGAAAAACTGCAGCGTTCGTTGATCGACGCCGCACAGCGCCAGGAAATGCAGGGCCAACCGGTGATTCTGCTGGTGGC AGGCCCGGTCCGAGCGATGTTGTCGCGGTTTGGACGTCTGGCAGTACCGAATTTGCACGTGTTGGCTTACCAGGAAATTCCTGACAATAAGCAAGTGACT ATCGTCGCGACAGTAGGGCCCAACGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTAGTGGGTTATGCAAGTGAAGCGTTTTTTCGCCGCCGATATGCGTCAGGCCATGAAACTGGTGCGTGATGAGCTGGGCGCCGATGCCGCCATTATCGG TAACCGCCGCATCGCCGGCGGTGTGGAGCTGACGGCTGCCCTGGATTACACCCCTCAGGCCCTGGCGCCACGCGTGCCGAACATGGAACTCGAAGACGAG CTGCGCAAGACCGCCTCGCGCATTGTGTCGGCCCAGGCCGAGCTGAGCATGCGCGGCGACAGCGACACCACCACCAATCGCCAGCTGTTTGCCGGCCTGC CGCTGACCGCTGCCGAGCCGCTGGTGGAGCCGACCTTTGTCGAACCGCCGCGTCCTGCCGCACCGGCCCCGGCCGCCAGCGTCGACCAGCGCGTATTCGA TTCGATGCGCTTTGAACTCAACGGCCTGCGTGAACTGCTCGAAGTGCAACTGGGCTCGCTGGCCTGGAACCAATTGCAAGGCAGCAAGCCGCAACAGGCC
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| Amino Acid Sequence |
>flagellar biosynthesis protein FlhA
MDRSQMFGTARTTLTDLSRGNLGVPLLLLVMLAMMMLPMPPFLLDVFFTFNIALSVVVLLVCVYALRPLDFAVFPTILLVATLLRLALNVASTRVVMLHG QDGHAAAGKVIQAFGEVVIGGNYVVGIVVFAILMIINFVVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQNQAKSRRLEVAQEAEFYGSMDG ASKFVRGDAIAGLLILFINLIGGMAVGIFQHGMTFGDAGKVYALLTIGDGLVAQLPSLLLSTAAAIMVTRASGSEDMGKQISRQMFASPKALAVAAGIMA IMGIVPGMPHVSFLTMAALAGGGAYLFWKKQNAVKVQALQEVARQQELLPSPARAQETKELGWDDVTPIDMIGLEVGYRLIPLVDRNQGGQLLARIKGVR KKLSQDLGFLMPTVHIRDNLDLAPSAYRLTLMGVILAEAEIYPDRELAINPGQVFGSLNGITAKDPAFGLEAVWIEVSQRSQAQSLGYTVVDASTVVATH LNQILYKHSHELIGHEEVQQLMGLLAKASPKLAEELVPGVLSLSQLLKVLQALLAEQVPVRDIRSIAEAIANNAAKSQDTAALVASVRVGLSRAIVQSIV GLDSELPVITLEPRLEQILLNSIQKAGLGQEEGVLLEPSMAEKLQRSLIDAAQRQEMQGQPVILLVAGPVRAMLSRFGRLAVPNLHVLAYQEIPDNKQVT IVATVGPNG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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